Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
EXOSC3Q9NQT5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 MTND5P30-201ENST00000452896 1731 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-552P-201ENST00000362869 119 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-443P-201ENST00000384780 107 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 SNORD70.1-201ENST00000391007 85 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1158P-201ENST00000391167 107 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-903P-201ENST00000391270 109 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-607P-201ENST00000411283 108 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 TOMM20P4-201ENST00000427861 435 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL606489.2-201ENST00000433886 234 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC074344.1-201ENST00000512823 224 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC104136.1-201ENST00000512969 394 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AGGF1P4-201ENST00000568249 801 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC103987.3-201ENST00000582071 292 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 MIR4672-201ENST00000583126 81 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC104073.3-201ENST00000610942 955 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RMST_4.1-201ENST00000616886 107 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL354950.2-201ENST00000617939 290 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL158209.2-201ENST00000619266 216 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AC026585.1-201ENST00000619582 524 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 OR5AK4P-201ENST00000635912 903 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 MIR6863-201ENST00000636112 90 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 Z75746.1-201ENST00000440243 2080 ntBASIC2.09□□□□□ -2.07
EXOSC3Q9NQT5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.09□□□□□ -2.08
EXOSC3Q9NQT5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
EXOSC3Q9NQT5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 Y_RNA.318-201ENST00000365131 97 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-996P-201ENST00000365438 107 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 SNORD116-20-201ENST00000384529 92 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-1127P-201ENST00000384580 107 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 SNORA16.2-201ENST00000390991 127 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 RNU2-29P-201ENST00000410423 189 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC097463.2-201ENST00000421074 142 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 BX276092.3-201ENST00000424182 230 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 RNU7-26P-201ENST00000458980 63 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 SCARNA18-201ENST00000459004 134 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 MTAPP1-201ENST00000489154 819 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC105417.1-201ENST00000514691 285 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 HIF1AP1-201ENST00000553642 175 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 BNIP3P30-201ENST00000601184 574 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC012507.3-201ENST00000603556 477 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 uc_338.11-201ENST00000619132 160 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 AC139792.3-201ENST00000623525 224 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 MIR7157-201ENST00000635801 60 ntBASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
EXOSC3Q9NQT5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-486P-201ENST00000363116 107 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-517P-201ENST00000384362 110 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 SNORA51.11-201ENST00000384442 131 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-393P-201ENST00000384475 107 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AL589823.1-201ENST00000429577 183 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 MICF-203ENST00000432679 129 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 HMGB1P31-201ENST00000437242 427 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 PRPS1P1-201ENST00000445305 876 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC073415.1-201ENST00000449240 153 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC012308.1-201ENST00000451232 178 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 SNRPFP3-201ENST00000457792 225 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 GMFBP1-201ENST00000467831 427 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 RPL7P43-201ENST00000478876 753 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 RNA5SP112-201ENST00000515937 99 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms