Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC093536.2-201ENST00000565257 1406 ntBASIC3□□□□□ -1.93
DDX4Q9NQI0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX4Q9NQI0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
DDX4Q9NQI0 AC121333.1-201ENST00000567488 2709 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.72-201ENST00000362894 103 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 RNU6-270P-201ENST00000364131 105 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 SNORD114-30-201ENST00000364448 72 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 RNU6-1179P-201ENST00000384667 107 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 SNORA40C-201ENST00000391285 128 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 POLHP1-201ENST00000411806 470 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AL353621.1-201ENST00000418219 243 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC009296.1-201ENST00000443146 155 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AL078601.1-201ENST00000444542 271 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 ANXA2P1-201ENST00000505539 926 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 RNU6-703P-201ENST00000516946 107 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 SNORA31.19-201ENST00000517079 126 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC025755.1-201ENST00000521306 278 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 CKS1BP7-201ENST00000522230 235 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 NACAP3-201ENST00000552100 481 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC018638.8-201ENST00000588755 281 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC092807.2-201ENST00000609367 243 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC004852.3-201ENST00000614131 326 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 RMST_4.1-201ENST00000616886 107 ntBASIC2.99□□□□□ -1.93
DDX4Q9NQI0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX4Q9NQI0 AC010680.1-201ENST00000590024 3590 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-778P-201ENST00000363269 103 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU1-105P-201ENST00000363470 161 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-522P-201ENST00000364497 107 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU1-73P-201ENST00000383971 164 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 SNORA70B-201ENST00000384210 135 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-332P-201ENST00000391193 108 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 SNORA26.7-201ENST00000391288 122 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-876P-201ENST00000391295 104 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AL627311.1-201ENST00000431514 115 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 FTH1P25-201ENST00000447665 469 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RPL26P9-201ENST00000457466 433 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC007547.1-201ENST00000462177 490 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AP000852.1-201ENST00000472460 573 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC018710.1-201ENST00000506509 158 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC025465.4-201ENST00000513422 638 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-572P-201ENST00000516724 80 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC090115.3-201ENST00000553218 849 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 MIR4782-201ENST00000577987 79 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 MIR548S-201ENST00000581352 82 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC012119.1-201ENST00000603184 222 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC092747.3-201ENST00000603769 301 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC019159.1-201ENST00000605094 187 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 AC103705.1-201ENST00000619013 241 ntBASIC2.98□□□□□ -1.93
DDX4Q9NQI0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
DDX4Q9NQI0 RNU6-884P-201ENST00000363889 107 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.530-201ENST00000384587 101 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 MT-TL1-201ENST00000386347 75 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 MIR767-201ENST00000390228 109 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.623-201ENST00000411128 95 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 RNU6-607P-201ENST00000411283 108 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AL513185.2-201ENST00000425543 193 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 DYNLL1P5-201ENST00000467158 270 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC139453.3-201ENST00000493276 369 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 SEM1P1-201ENST00000506694 209 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC098799.2-201ENST00000509466 868 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 Y_RNA.665-201ENST00000516177 98 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 MIR892C-201ENST00000516410 77 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 CYCSP27-201ENST00000527643 293 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AL118558.2-201ENST00000556294 238 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AL391261.3-201ENST00000557194 520 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC073539.2-201ENST00000597113 165 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 U6.99-201ENST00000637524 83 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.97□□□□□ -1.93
DDX4Q9NQI0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms