Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC008571.1-201ENST00000467232 300 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 RN7SL385P-201ENST00000468873 276 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC110768.1-201ENST00000509222 400 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 HSBP1P1-201ENST00000555205 166 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 OR1M4P-201ENST00000589199 287 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AL161798.1-201ENST00000604630 131 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC078938.1-201ENST00000620993 318 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC073308.1-201ENST00000623696 305 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NRIP3Q9NQ35 MFSD8-236ENST00000641509 4050 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 Y_RNA.533-201ENST00000384596 114 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 U8.11-201ENST00000384699 133 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 U8.12-201ENST00000384701 133 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 Z85995.1-201ENST00000415547 335 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 OR2AQ1P-201ENST00000451972 200 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 NUTF2P7-201ENST00000453086 375 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 CECR9-201ENST00000453421 199 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 U8.18-201ENST00000459285 133 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 RPL37P6-201ENST00000460682 294 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC011005.2-201ENST00000487324 359 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC093331.1-201ENST00000521474 169 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 MIR5692A1-201ENST00000580523 69 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 RAC1P9-201ENST00000604990 392 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AL021879.1-201ENST00000611756 288 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AL731566.2-201ENST00000618971 317 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 AC008669.1-201ENST00000565823 2178 ntBASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NRIP3Q9NQ35 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NRIP3Q9NQ35 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NRIP3Q9NQ35 SNORD9-201ENST00000362566 104 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 Y_RNA.476-201ENST00000384347 108 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 Y_RNA.483-201ENST00000384380 101 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AL138885.1-201ENST00000405921 675 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU6-101P-201ENST00000410323 104 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU6-293P-201ENST00000411259 106 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 ATP5A1P2-201ENST00000412323 255 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RPS15AP6-201ENST00000420703 385 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 ELOCP20-201ENST00000422460 345 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AL583843.1-201ENST00000456070 346 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RPS4XP2-201ENST00000458402 793 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU7-169P-201ENST00000459456 61 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC091179.1-201ENST00000461606 579 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 HMGN1P11-201ENST00000508668 303 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC008716.1-201ENST00000511084 513 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU6-475P-201ENST00000516073 104 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 Y_RNA.715-201ENST00000517082 110 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU6-264P-201ENST00000517134 104 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC023157.2-201ENST00000540596 141 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 CPDP1-201ENST00000579660 283 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 AC005357.1-201ENST00000588399 301 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RPL23AP78-201ENST00000599928 470 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 RMST_4.1-201ENST00000616886 107 ntBASIC3.15□□□□□ -1.91
NRIP3Q9NQ35 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms