Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 MED28P2-201ENST00000475771 317 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL163973.1-201ENST00000484753 577 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 MTAPP1-201ENST00000489154 819 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 SMURF2P1-201ENST00000514992 481 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 MIR5007-201ENST00000583098 95 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL021997.1-201ENST00000605757 193 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 uc_338.11-201ENST00000619132 160 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL359854.1-201ENST00000614203 1594 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-37P-201ENST00000362692 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-11P-201ENST00000364234 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-7-201ENST00000364784 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-8-201ENST00000365467 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-25P-201ENST00000383873 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-1-201ENST00000383898 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-48P-201ENST00000384161 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-36P-201ENST00000384172 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-4P-201ENST00000384205 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-5P-201ENST00000384238 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-3P-201ENST00000384314 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-16P-201ENST00000384385 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-15P-201ENST00000384534 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 SNORA44-201ENST00000384584 132 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-2-201ENST00000384627 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-29P-201ENST00000384637 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-9-201ENST00000384776 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-33P-201ENST00000384793 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-220P-201ENST00000390919 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 SNORD37.1-201ENST00000390968 65 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RPL30P4-201ENST00000429309 333 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RPL23AP7-203ENST00000449021 469 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC096576.1-201ENST00000489014 359 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU2-69P-201ENST00000516061 100 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AP004607.1-201ENST00000524456 203 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-6P-201ENST00000606623 107 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 uc_338.14-201ENST00000613162 166 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 MTND4P27-201ENST00000450813 1354 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 Z75746.1-201ENST00000440243 2080 ntBASIC2.32□□□□□ -2.04
VIPAS39Q9H9C1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-623P-201ENST00000363143 105 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 BTF3P7-201ENST00000407097 488 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC138623.1-201ENST00000418060 216 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 SRIP2-201ENST00000428470 166 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC016691.1-201ENST00000441321 413 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AL021397.1-201ENST00000451806 248 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC009646.1-201ENST00000510455 318 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 SNORA31.18-201ENST00000517043 134 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 SCARNA3-201ENST00000517097 143 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC109329.2-201ENST00000519658 482 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC104383.1-201ENST00000530297 370 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AL137161.1-201ENST00000532231 390 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.31□□□□□ -2.04
VIPAS39Q9H9C1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms