Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.08□□□□□ -1.92
CDT1Q9H211 AC093249.1-201ENST00000567049 203 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 MIR5692A1-201ENST00000580523 69 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.08□□□□□ -1.92
CDT1Q9H211 AC103705.1-201ENST00000619013 241 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
CDT1Q9H211 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDT1Q9H211 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDT1Q9H211 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
CDT1Q9H211 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR369-201ENST00000362155 70 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-1303P-201ENST00000364841 107 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.315-201ENST00000365117 102 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-395P-201ENST00000365662 106 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.384-201ENST00000383909 102 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.399-201ENST00000383955 105 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-1035P-201ENST00000384477 107 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-1179P-201ENST00000384667 107 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR512-1-201ENST00000384913 84 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR1302-11-201ENST00000408051 138 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR1302-9-201ENST00000408365 138 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR1302-10-201ENST00000408734 138 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 ARL5AP1-201ENST00000418991 388 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.07□□□□□ -1.92
CDT1Q9H211 AL353729.1-201ENST00000425044 720 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 SKA2P1-201ENST00000425592 390 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDT1Q9H211 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.07□□□□□ -1.92
CDT1Q9H211 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.07□□□□□ -1.92
CDT1Q9H211 AC027575.1-201ENST00000481064 460 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.07□□□□□ -1.92
CDT1Q9H211 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-559P-201ENST00000516151 98 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 RNU6-566P-201ENST00000516790 107 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 SNORA25.17-201ENST00000517184 124 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 COPS8P3-201ENST00000526024 482 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AP000889.2-201ENST00000532684 490 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.07□□□□□ -1.92
CDT1Q9H211 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
CDT1Q9H211 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
CDT1Q9H211 DNAJC8P1-201ENST00000554535 372 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AMZ2P1-203ENST00000565833 850 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR3609-201ENST00000582661 80 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.07□□□□□ -1.92
CDT1Q9H211 MIR1302-2-201ENST00000607096 138 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.812-201ENST00000610788 101 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 U2.17-201ENST00000611454 95 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.784-201ENST00000613803 101 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 AL138880.2-201ENST00000616214 239 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.787-201ENST00000616522 101 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.780-201ENST00000617336 101 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 Y_RNA.801-201ENST00000619005 101 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDT1Q9H211 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
CDT1Q9H211 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDT1Q9H211 AC022336.2-201ENST00000568966 2538 ntBASIC3.07□□□□□ -1.92
CDT1Q9H211 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CDT1Q9H211 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDT1Q9H211 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDT1Q9H211 SNORD3E-201ENST00000362899 217 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 Y_RNA.162-201ENST00000363683 102 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 RNU6-82P-201ENST00000363970 107 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 SNORD42.2-201ENST00000365570 69 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.06□□□□□ -1.92
CDT1Q9H211 MYL8P-204ENST00000431574 518 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 RNU7-167P-201ENST00000459160 62 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC091179.1-201ENST00000461606 579 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC117503.1-201ENST00000472241 394 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 MTND5P5-201ENST00000503764 376 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 RNA5SP356-201ENST00000515972 94 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 RNU6-189P-201ENST00000516120 101 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 RNU6-256P-201ENST00000516747 97 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 RNA5SP454-201ENST00000517231 127 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC090115.3-201ENST00000553218 849 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 TRAV37-201ENST00000553906 342 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 MTCO3P23-201ENST00000561363 289 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CDT1Q9H211 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.06□□□□□ -1.92
CDT1Q9H211 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC007938.3-201ENST00000604965 623 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 AC124303.1-201ENST00000605703 360 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC022418.1-201ENST00000624118 445 ntBASIC3.06□□□□□ -1.92
CDT1Q9H211 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.06□□□□□ -1.92
CDT1Q9H211 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
CDT1Q9H211 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDT1Q9H211 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms