Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 CUL1P1-201ENST00000509510 2425 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 MIR449B-201ENST00000384995 97 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 MIR325-201ENST00000385260 98 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 RNU2-14P-201ENST00000411053 191 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC093578.1-201ENST00000415219 368 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 RNU6-911P-201ENST00000516523 104 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 IGKV2-23-201ENST00000518729 323 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 DEFB108E-201ENST00000524692 240 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC084851.1-201ENST00000529105 249 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC024220.1-201ENST00000603675 484 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC009779.6-201ENST00000603972 165 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AL034408.1-202ENST00000636088 415 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF38Q9H0F5 AC027290.2-201ENST00000623210 18662 ntBASIC3.95□□□□□ -1.78
RNF38Q9H0F5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AL157777.2-201ENST00000258070 137 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RNU6-774P-201ENST00000363238 107 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 U3.6-201ENST00000363622 211 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RNU6-280P-201ENST00000364145 104 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.274-201ENST00000364714 101 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC096920.1-201ENST00000423991 241 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 SDAD1P3-201ENST00000427380 333 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 Z82210.1-201ENST00000440037 231 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 NDUFB1P2-201ENST00000449477 176 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RNU7-87P-201ENST00000459343 62 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RPL23AP45-201ENST00000476406 468 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC010469.2-201ENST00000496412 480 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AK3P2-201ENST00000507976 429 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC074250.1-201ENST00000511117 192 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RAC1P2-201ENST00000511164 579 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC026726.1-201ENST00000512859 601 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RNU6-406P-201ENST00000516470 107 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.713-201ENST00000517013 96 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC026403.1-201ENST00000518938 295 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC009318.2-201ENST00000610917 651 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 MIR8076-201ENST00000611401 83 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC002546.1-201ENST00000588041 2504 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 AL161912.2-201ENST00000565707 3007 ntBASIC3.94□□□□□ -1.78
RNF38Q9H0F5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF38Q9H0F5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AL391987.6-201ENST00000305671 199 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 RNA5SP119-201ENST00000362715 117 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 SNORD50.1-201ENST00000362987 71 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 RNA5SP51-201ENST00000364750 119 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.458-201ENST00000384240 102 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.555-201ENST00000384673 110 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 SNORA19-201ENST00000384737 128 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AP000567.1-201ENST00000406413 156 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 RHEBP3-201ENST00000411920 351 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AL512844.2-201ENST00000433990 593 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AC004383.1-201ENST00000438135 289 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms