Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 MIR1248-201ENST00000629190 106 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC010149.2-201ENST00000637608 315 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 ZNF680P1-201ENST00000436625 1469 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 Y_RNA.99-201ENST00000363138 105 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 SNORD26-201ENST00000384147 75 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 RNU6-1242P-201ENST00000391052 103 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 SNORA67.6-201ENST00000391093 99 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 RPS20P2-201ENST00000402520 389 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 Y_RNA.597-201ENST00000410463 100 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 snoU13.14-201ENST00000459372 104 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 SNORA31.17-201ENST00000516953 127 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AL158032.1-201ENST00000605401 106 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC116312.1-201ENST00000606841 314 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AL590240.4-201ENST00000616908 390 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AP002782.1-201ENST00000623107 614 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AL445523.1-201ENST00000451184 1362 ntBASIC1.08□□□□□ -2.24
NKX6-2Q9C056 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 CBX3P1-201ENST00000325243 554 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 SNORD56.1-201ENST00000362913 68 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 UBE2V1P2-201ENST00000397758 440 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 RPS15AP12-201ENST00000419498 388 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AL365400.1-201ENST00000431854 640 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 RPS15AP10-201ENST00000432472 382 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 MTCYBP40-201ENST00000509390 1135 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 SNORA25.15-201ENST00000516487 89 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC107934.1-201ENST00000522215 217 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC090821.2-201ENST00000523552 176 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AP003122.4-201ENST00000530980 758 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 RRN3P3-201ENST00000549207 578 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 YWHAZP1-201ENST00000556286 722 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.07□□□□□ -2.24
NKX6-2Q9C056 SCARNA4-202ENST00000625402 129 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC103706.2-201ENST00000638080 240 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.07□□□□□ -2.24
NKX6-2Q9C056 AC245060.5-201ENST00000610778 3293 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 OR4G2P-201ENST00000328113 903 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 RNU6-661P-201ENST00000362409 107 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 RPS3AP36-201ENST00000398190 775 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AL354695.1-201ENST00000427935 228 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AL035407.1-201ENST00000429211 571 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 HMGB1P31-201ENST00000437242 427 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AL035666.1-201ENST00000446195 348 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 USP9YP25-201ENST00000457708 443 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC068587.2-201ENST00000478386 781 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC174048.1-201ENST00000603389 144 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AL138889.2-201ENST00000603883 242 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC010900.2-201ENST00000604508 210 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 AC130454.1-201ENST00000622948 401 ntBASIC1.06□□□□□ -2.24
NKX6-2Q9C056 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NKX6-2Q9C056 RNA5SP493-201ENST00000364115 91 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 RNU6-160P-201ENST00000384591 107 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 RNU6-1179P-201ENST00000384667 107 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AL627390.1-201ENST00000396055 340 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 RSL24D1P4-201ENST00000400938 484 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 NCOR1P3-201ENST00000420479 303 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AL358453.1-201ENST00000422522 250 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AL353777.1-201ENST00000425552 326 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AL354941.1-201ENST00000438600 464 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX6-2Q9C056 DUXAP8-207ENST00000456786 622 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC009646.1-201ENST00000510455 318 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 RNU2-10P-201ENST00000516375 211 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 SNORA43.2-201ENST00000516652 128 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms