Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 BX284668.6-201ENST00000606899 438 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.47□□□□□ -2.33
SCAPERQ9BY12 MIR6759-201ENST00000638110 65 ntBASIC0.47□□□□□ -2.33
SCAPERQ9BY12 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
SCAPERQ9BY12 SNORA25-201ENST00000384384 134 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 CCNG1P1-201ENST00000406783 885 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 MTCO3P5-201ENST00000433620 714 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.46□□□□□ -2.34
SCAPERQ9BY12 HMGN1P13-201ENST00000505795 138 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.46□□□□□ -2.34
SCAPERQ9BY12 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AC010620.1-201ENST00000601088 1102 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AC004805.2-201ENST00000605382 482 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AC079416.3-201ENST00000624479 549 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 AL159972.1-201ENST00000625150 448 ntBASIC0.46□□□□□ -2.34
SCAPERQ9BY12 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 Y_RNA.274-201ENST00000364714 101 ntBASIC0.45□□□□□ -2.34
SCAPERQ9BY12 RPL22P22-201ENST00000395439 379 ntBASIC0.45□□□□□ -2.34
SCAPERQ9BY12 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 MTCO2P2-201ENST00000591258 225 ntBASIC0.45□□□□□ -2.34
SCAPERQ9BY12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.45□□□□□ -2.34
SCAPERQ9BY12 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SCAPERQ9BY12 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.44□□□□□ -2.34
SCAPERQ9BY12 HSPE1P13-201ENST00000451143 297 ntBASIC0.44□□□□□ -2.34
SCAPERQ9BY12 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.44□□□□□ -2.34
SCAPERQ9BY12 APOOP3-201ENST00000536787 586 ntBASIC0.44□□□□□ -2.34
SCAPERQ9BY12 EIF4A1P12-201ENST00000551910 141 ntBASIC0.44□□□□□ -2.34
SCAPERQ9BY12 VN1R82P-201ENST00000601481 356 ntBASIC0.44□□□□□ -2.34
SCAPERQ9BY12 AL357094.1-201ENST00000603845 844 ntBASIC0.44□□□□□ -2.34
SCAPERQ9BY12 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.44□□□□□ -2.34
SCAPERQ9BY12 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RNA5SP299-201ENST00000391203 116 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RNU6-77P-201ENST00000410554 91 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 FTH1P12-201ENST00000432137 551 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RPS15AP9-201ENST00000439856 381 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RPL26P26-201ENST00000480251 434 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC084024.2-201ENST00000503480 791 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC091435.1-201ENST00000505442 584 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RNU6-586P-201ENST00000517265 104 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC109329.1-201ENST00000518744 317 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AL020997.3-201ENST00000602843 359 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AP000860.1-201ENST00000605250 559 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.43□□□□□ -2.34
SCAPERQ9BY12 MIR6086-201ENST00000638065 55 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC119674.1-220ENST00000641502 1048 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 AC100821.1-201ENST00000523153 2479 ntBASIC0.43□□□□□ -2.34
SCAPERQ9BY12 RNU6-115P-201ENST00000364310 107 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.42□□□□□ -2.34
SCAPERQ9BY12 MIR525-201ENST00000384978 85 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AC005345.1-201ENST00000431868 217 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.42□□□□□ -2.34
SCAPERQ9BY12 RNU6-889P-201ENST00000517189 103 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AP000763.2-201ENST00000540641 163 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AC002545.1-201ENST00000592511 181 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.42□□□□□ -2.34
SCAPERQ9BY12 AC009033.1-201ENST00000624279 431 ntBASIC0.42□□□□□ -2.34
SCAPERQ9BY12 SNORA4.1-201ENST00000364263 144 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC002381.1-201ENST00000447049 280 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 NDUFA5P7-201ENST00000452914 242 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 RPL32P14-201ENST00000463196 378 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AL163195.1-201ENST00000496941 348 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 TRBVA-201ENST00000498804 316 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.41□□□□□ -2.34
SCAPERQ9BY12 RNU6-197P-201ENST00000516680 100 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 RNA5SP290-201ENST00000517133 127 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC008088.1-201ENST00000580993 280 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AL583856.2-201ENST00000606298 543 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AL132822.1-201ENST00000617063 513 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC008993.2-201ENST00000631744 806 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 AC134026.1-201ENST00000623249 2239 ntBASIC0.41□□□□□ -2.34
SCAPERQ9BY12 MIR32-201ENST00000384965 70 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 MTND4P6-201ENST00000438297 472 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC132479.1-201ENST00000449160 144 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC022616.8-201ENST00000533569 253 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC005951.2-201ENST00000576282 495 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 MZT1P2-201ENST00000604387 248 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AL603758.1-201ENST00000618654 241 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 AC138627.2-201ENST00000624202 601 ntBASIC0.4□□□□□ -2.34
SCAPERQ9BY12 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.4□□□□□ -2.35
SCAPERQ9BY12 RNU6-1065P-201ENST00000384513 106 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms