Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.584-201ENST00000391090 114 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 HMGN2P27-201ENST00000427352 270 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AL135790.2-201ENST00000437701 267 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AL589765.3-201ENST00000446084 462 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 RPS4XP13-201ENST00000483219 789 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 RNA5SP49-201ENST00000516450 115 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 Y_RNA.685-201ENST00000516532 108 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 CYCSP23-201ENST00000519781 313 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC133485.4-201ENST00000561835 220 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC138907.4-201ENST00000570107 226 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC006272.2-201ENST00000594725 163 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC025521.1-201ENST00000621624 286 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 SNORA43.4-201ENST00000629559 138 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 AC018555.1-201ENST00000567548 1980 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 CENPCP1-201ENST00000533085 2578 ntBASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL25A1Q9BXS0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 RNU6-873P-201ENST00000363833 107 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 RNU6-1048P-201ENST00000364054 107 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 RNA5SP173-201ENST00000364857 136 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 Y_RNA.498-201ENST00000384460 102 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 RNU6-19P-201ENST00000384718 107 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AC092798.1-201ENST00000458542 409 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AC139453.3-201ENST00000493276 369 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 RNU6-561P-201ENST00000516222 102 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 FTH1P11-201ENST00000517577 551 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AC016256.1-201ENST00000547971 354 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AC005255.1-201ENST00000593748 216 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 MIR6500-201ENST00000622700 86 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 AC012640.5-201ENST00000623897 319 ntBASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL25A1Q9BXS0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RNU6-969P-201ENST00000383900 105 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RNU6-72P-201ENST00000384285 79 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 SNORA57.3-201ENST00000411095 141 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 ELOCP21-201ENST00000412558 336 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RPS29P4-201ENST00000414733 161 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AC007560.1-201ENST00000426912 237 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RPL30P12-201ENST00000474666 353 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 HSPE1P6-201ENST00000479457 291 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 RNU6-436P-201ENST00000516171 114 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 U3.45-201ENST00000607547 219 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 Z95331.1-201ENST00000623075 23112 ntBASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL25A1Q9BXS0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 AC010329.5-201ENST00000623497 2174 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 AC107027.3-201ENST00000565095 3473 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 RNU6-1131P-201ENST00000364955 107 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 RNU6-142P-201ENST00000384019 107 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 RNU6-49P-201ENST00000384256 107 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 RNU6-106P-201ENST00000384405 107 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 MT-TT-201ENST00000387460 66 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 AL592291.1-201ENST00000403830 352 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 AL355497.1-201ENST00000406262 551 ntBASIC4.55□□□□□ -1.68
COL25A1Q9BXS0 RPL26P27-201ENST00000414397 437 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 615.6 ms