Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL627311.1-201ENST00000431514 115 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 CYCSP32-201ENST00000440548 321 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC098831.1-201ENST00000440661 216 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 S100A11P2-201ENST00000467589 312 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 MTCO3P38-201ENST00000468910 766 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 RPS27AP10-201ENST00000496103 208 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC074344.1-201ENST00000512823 224 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 RNU2-69P-201ENST00000516061 100 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 BNIP3P6-201ENST00000549284 499 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC234778.2-201ENST00000566241 354 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 MIR4782-201ENST00000577987 79 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AP000907.4-201ENST00000604143 237 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 U2.17-201ENST00000611454 95 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 AC022418.1-201ENST00000624118 445 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 U6.99-201ENST00000637524 83 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.34□□□□□ -2.03
CCDC28BQ9BUN5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.04
CCDC28BQ9BUN5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC28BQ9BUN5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC28BQ9BUN5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC28BQ9BUN5 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-461P-201ENST00000364195 107 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU4-66P-201ENST00000365199 138 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-658P-201ENST00000384606 106 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-1179P-201ENST00000384667 107 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 SNORA16.2-201ENST00000390991 127 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-607P-201ENST00000411283 108 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AL365496.1-201ENST00000426885 215 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 MTND1P2-201ENST00000430604 821 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 MTCO3P18-201ENST00000440206 761 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC233279.1-201ENST00000455300 423 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU7-167P-201ENST00000459160 62 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RPL21P99-201ENST00000480369 423 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AL117351.2-201ENST00000513571 157 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-1183P-201ENST00000517054 60 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 CENPUP1-201ENST00000526649 1202 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AP000889.2-201ENST00000532684 490 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC010525.2-201ENST00000590920 195 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC073539.2-201ENST00000597113 165 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 SRGNP1-201ENST00000603392 451 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AP003400.5-201ENST00000624827 617 ntBASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC28BQ9BUN5 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 Y_RNA.157-201ENST00000363638 102 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 RNU4-20P-201ENST00000365601 151 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 RNU1-52P-201ENST00000384190 164 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR670-201ENST00000390142 98 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AC007560.1-201ENST00000426912 237 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AL139415.2-201ENST00000431968 163 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 ERLEC1P1-201ENST00000433806 578 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AL445687.1-201ENST00000439946 251 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 PRPS1P1-201ENST00000445305 876 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 RPL31P58-201ENST00000469001 379 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AC011005.2-201ENST00000487324 359 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 Y_RNA.654-201ENST00000497848 106 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 CCDC34P1-201ENST00000507441 517 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR892C-201ENST00000516410 77 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 OR11H5P-201ENST00000554039 926 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 LINC00933-203ENST00000559812 219 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR5583-1-201ENST00000580941 59 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR4801-201ENST00000582704 82 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR4658-201ENST00000584344 65 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 HMGN2P15-201ENST00000585707 270 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MTND4LP5-201ENST00000605152 292 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 RNU6-89P-201ENST00000606519 100 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 Z82243.1-201ENST00000609432 473 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 RMST_3.1-201ENST00000611651 109 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 MIR3662-201ENST00000637030 95 ntBASIC2.32□□□□□ -2.04
CCDC28BQ9BUN5 AC024614.3-201ENST00000637860 256 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms