Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 GSTA11P-201ENST00000452866 669 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AL583843.1-201ENST00000456070 346 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC010655.3-201ENST00000478818 450 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 MRPS35P2-201ENST00000508242 191 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC026782.1-201ENST00000512952 449 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.708-201ENST00000516950 96 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC023442.1-201ENST00000531247 422 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 MIR5692C1-201ENST00000585309 91 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC104695.3-201ENST00000604052 296 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 PRR13P7-201ENST00000605538 430 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC009229.3-201ENST00000608056 282 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC064801.1-201ENST00000612025 407 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 PISRT1.1-201ENST00000616930 107 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AL136360.1-201ENST00000503377 1900 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 SNORD74.4-201ENST00000364129 80 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 SNORD14B-201ENST00000364533 90 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU6-166P-201ENST00000384371 107 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU6-658P-201ENST00000384606 106 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 MIR1183-201ENST00000408856 89 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU2-3P-201ENST00000410144 191 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC093151.1-201ENST00000427711 313 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC006026.2-201ENST00000457376 180 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU7-138P-201ENST00000459479 64 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC104472.2-201ENST00000469035 601 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 RNU6-635P-201ENST00000516651 102 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 LINC00933-203ENST00000559812 219 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC113195.1-201ENST00000579952 141 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AP000787.2-201ENST00000604432 568 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 AC004852.3-201ENST00000614131 326 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRFN3Q9BTN0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RNU6-270P-201ENST00000364131 105 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RNU6-214P-201ENST00000384130 107 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.645-201ENST00000391229 102 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RN7SKP167-201ENST00000411047 285 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AL513477.1-202ENST00000417061 214 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RPS15AP6-201ENST00000420703 385 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AL590632.1-201ENST00000424289 371 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC008267.5-201ENST00000424928 265 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 snoU13.28-201ENST00000459235 104 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC110794.1-201ENST00000505816 425 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RNU6-470P-201ENST00000515954 104 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RNU6-699P-201ENST00000517081 110 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC009812.2-201ENST00000517657 457 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 IGKV2-26-201ENST00000518305 343 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 RNU6-323P-201ENST00000521915 107 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 MIR4425-201ENST00000580572 84 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC018889.1-201ENST00000605372 397 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC018462.2-201ENST00000605375 395 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 AC002044.1-201ENST00000606707 158 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
LRFN3Q9BTN0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms