Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 SNORA31.19-201ENST00000517079 126 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 AC069113.1-201ENST00000517763 267 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 AC104576.1-201ENST00000524225 88 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC034105.4-201ENST00000568304 277 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.35□□□□□ -2.03
VGLL1Q99990 MIR5690-201ENST00000583739 73 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC011494.1-201ENST00000596454 237 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC008739.3-201ENST00000603262 127 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 FTX_3.1-201ENST00000610451 147 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC090740.1-201ENST00000623193 2262 ntBASIC2.35□□□□□ -2.03
VGLL1Q99990 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.35□□□□□ -2.03
VGLL1Q99990 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VGLL1Q99990 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.34□□□□□ -2.03
VGLL1Q99990 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VGLL1Q99990 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
VGLL1Q99990 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
VGLL1Q99990 Y_RNA.5-201ENST00000362334 102 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-778P-201ENST00000363269 103 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 Y_RNA.151-201ENST00000363566 112 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-1059P-201ENST00000363752 98 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-270P-201ENST00000364131 105 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU1-33P-201ENST00000364249 162 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-692P-201ENST00000384496 107 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-140P-201ENST00000384566 108 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 MIR490-201ENST00000384865 128 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VGLL1Q99990 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-1050P-201ENST00000410388 107 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 SNORD56-201ENST00000413522 71 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AL096701.2-201ENST00000416920 238 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RPL21P40-201ENST00000428586 483 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.34□□□□□ -2.03
VGLL1Q99990 AL627311.1-201ENST00000431514 115 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AL512844.2-201ENST00000433990 593 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.34□□□□□ -2.03
VGLL1Q99990 RPL12P25-201ENST00000455592 494 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC092798.1-201ENST00000458542 409 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 Y_RNA.653-201ENST00000459091 95 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RPL21P10-201ENST00000463521 490 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RPL7P42-201ENST00000481005 679 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC110794.1-201ENST00000505816 425 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC097473.1-201ENST00000508142 408 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 PTP4A1P4-201ENST00000512479 322 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNU6-572P-201ENST00000516724 80 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 RNA5SP291-201ENST00000517222 105 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.34□□□□□ -2.03
VGLL1Q99990 AC022634.1-201ENST00000520765 532 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.34□□□□□ -2.03
VGLL1Q99990 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.34□□□□□ -2.03
VGLL1Q99990 AL121821.2-201ENST00000556081 394 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 CYCSP39-201ENST00000565821 309 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 CPDP1-201ENST00000579660 283 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC009229.3-201ENST00000608056 282 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 ATP5A1P2-202ENST00000616464 443 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.34□□□□□ -2.03
VGLL1Q99990 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC099506.2-201ENST00000623074 221 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 AC027309.3-201ENST00000623419 351 ntBASIC2.34□□□□□ -2.03
VGLL1Q99990 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VGLL1Q99990 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VGLL1Q99990 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
VGLL1Q99990 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VGLL1Q99990 MTND5P30-201ENST00000452896 1731 ntBASIC2.34□□□□□ -2.04
VGLL1Q99990 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.33□□□□□ -2.04
VGLL1Q99990 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-37P-201ENST00000362692 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 Y_RNA.112-201ENST00000363250 102 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 Y_RNA.146-201ENST00000363549 102 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 Y_RNA.162-201ENST00000363683 102 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-11P-201ENST00000364234 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 SNORA63C-201ENST00000364578 129 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-7-201ENST00000364784 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-8-201ENST00000365467 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-25P-201ENST00000383873 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-1-201ENST00000383898 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-48P-201ENST00000384161 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-36P-201ENST00000384172 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-4P-201ENST00000384205 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-5P-201ENST00000384238 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-3P-201ENST00000384314 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-16P-201ENST00000384385 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-15P-201ENST00000384534 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-2-201ENST00000384627 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-29P-201ENST00000384637 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-9-201ENST00000384776 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-33P-201ENST00000384793 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 MIR7-3-201ENST00000384898 110 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AC243428.1-201ENST00000421099 264 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms