Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXC2Q99958 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
FOXC2Q99958 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 Y_RNA.672-201ENST00000516289 104 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 Y_RNA.688-201ENST00000516565 95 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 RNU6-1315P-201ENST00000517187 99 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.78□□□□□ -2.12
FOXC2Q99958 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXC2Q99958 PSMA3P-201ENST00000555485 635 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXC2Q99958 MIR3126-201ENST00000577443 74 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AC005771.1-201ENST00000585581 349 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AP002360.4-201ENST00000606980 481 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXC2Q99958 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXC2Q99958 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
FOXC2Q99958 Y_RNA.22-201ENST00000362492 102 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 SNORA25.9-201ENST00000365087 128 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 RNU6-169P-201ENST00000365336 107 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 RNU6-166P-201ENST00000384371 107 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 MIR561-201ENST00000385216 97 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AL133475.1-201ENST00000404414 305 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 U3.40-201ENST00000408706 208 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXC2Q99958 RNU6-1025P-201ENST00000410629 104 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 HMGN1P14-201ENST00000412459 517 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 USP9YP27-201ENST00000418455 438 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.77□□□□□ -2.13
FOXC2Q99958 RPS15AP12-201ENST00000419498 388 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 GAPDHP17-201ENST00000449858 1001 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 AC108078.2-201ENST00000510750 236 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 RNA5SP137-201ENST00000516833 135 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC022616.3-201ENST00000523940 148 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC011979.2-201ENST00000527568 352 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AP003072.2-201ENST00000527756 676 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 FAM92A1P1-201ENST00000528023 890 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AP000889.2-201ENST00000532684 490 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AP005136.1-201ENST00000579765 429 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXC2Q99958 AC078899.2-201ENST00000595282 212 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXC2Q99958 AC087045.1-201ENST00000605856 382 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
FOXC2Q99958 MIR8070-201ENST00000616510 88 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AC108479.2-201ENST00000617314 601 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AL031601.2-202ENST00000622650 282 ntBASIC1.77□□□□□ -2.13
FOXC2Q99958 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXC2Q99958 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXC2Q99958 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXC2Q99958 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.77□□□□□ -2.13
FOXC2Q99958 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXC2Q99958 MIR21-201ENST00000362134 72 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 SNORD56.2-201ENST00000363242 71 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 RNU6-39P-201ENST00000384344 107 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 RNY3P10-201ENST00000384764 102 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 RNU2-2P-201ENST00000410396 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC007283.2-201ENST00000424739 197 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AIMP1P2-201ENST00000425294 312 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AL163540.1-201ENST00000485382 386 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC107032.1-201ENST00000485945 480 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC007182.2-201ENST00000489251 402 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXC2Q99958 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AK6P1-201ENST00000540219 478 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AL157871.3-201ENST00000557231 293 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 MIR4529-201ENST00000578110 78 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC007229.1-201ENST00000590455 412 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AL713866.2-201ENST00000603579 219 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC096772.1-201ENST00000609146 564 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.15-201ENST00000611544 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.16-201ENST00000613119 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.12-201ENST00000613778 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.20-201ENST00000613956 192 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AC130324.3-201ENST00000614165 542 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.9-201ENST00000615427 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 AP001506.1-201ENST00000615444 211 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.11-201ENST00000616345 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.2-201ENST00000616535 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.3-201ENST00000617785 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.19-201ENST00000618602 191 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms