Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RNU6-325P-201ENST00000411132 105 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AL030996.1-201ENST00000411430 235 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AC138623.1-201ENST00000418060 216 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RPL23AP67-201ENST00000465341 474 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 SNRPGP7-201ENST00000469016 106 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 MED28P2-201ENST00000475771 317 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS1Q99742 AC124303.1-201ENST00000605703 360 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 uc_338.1-201ENST00000612113 180 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 PISRT1.1-201ENST00000616930 107 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS1Q99742 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS1Q99742 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS1Q99742 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 Z83843.1-201ENST00000604070 3685 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS1Q99742 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS1Q99742 AC017071.1-201ENST00000564407 2204 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NPAS1Q99742 Y_RNA.58-201ENST00000362807 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 Y_RNA.154-201ENST00000363624 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 RNU6-1317P-201ENST00000364582 104 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 RNY3P1-201ENST00000365085 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 RNY3-201ENST00000365484 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 SNORA70.4-201ENST00000365509 134 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 Y_RNA.387-201ENST00000383918 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 Y_RNA.490-201ENST00000384413 102 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 MIR517A-201ENST00000385001 87 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AL133475.1-201ENST00000404414 305 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AL117339.3-201ENST00000418733 162 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AL365496.1-201ENST00000426885 215 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC009414.1-201ENST00000427200 443 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 FABP5P14-201ENST00000437273 393 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.95□□□□□ -1.94
NPAS1Q99742 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
NPAS1Q99742 FGF7P4-201ENST00000509595 295 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS1Q99742 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AC093027.1-201ENST00000546698 429 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 CR383656.8-201ENST00000549046 145 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 TRAV32-201ENST00000553993 340 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS1Q99742 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 AC091152.3-201ENST00000604227 325 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC007179.3-201ENST00000604976 235 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC069234.5-201ENST00000611056 416 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AL161423.1-201ENST00000613700 262 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC024581.2-201ENST00000619986 252 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.95□□□□□ -1.94
NPAS1Q99742 MTND4P23-201ENST00000447723 1363 ntBASIC2.95□□□□□ -1.94
NPAS1Q99742 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NPAS1Q99742 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS1Q99742 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS1Q99742 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.95□□□□□ -1.94
NPAS1Q99742 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS1Q99742 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NPAS1Q99742 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NPAS1Q99742 SNORD46.1-201ENST00000364139 104 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 RNU6-336P-201ENST00000364891 107 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 MIR34B-201ENST00000385076 84 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 RN7SKP158-201ENST00000410453 326 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 RNU6-1304P-201ENST00000411374 106 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 AC074117.2-201ENST00000417130 397 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 AC006946.1-201ENST00000429106 328 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.94□□□□□ -1.94
NPAS1Q99742 AC236972.2-201ENST00000434979 310 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.94□□□□□ -1.94
NPAS1Q99742 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
NPAS1Q99742 AC114801.2-201ENST00000503825 781 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 RN7SKP282-201ENST00000516824 299 ntBASIC2.94□□□□□ -1.94
NPAS1Q99742 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.94□□□□□ -1.94
NPAS1Q99742 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.94□□□□□ -1.94
NPAS1Q99742 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms