Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AL079305.1-201ENST00000623159 3008 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC6Q99741 RNU6-1309P-201ENST00000363305 108 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 SNORD32A-201ENST00000364805 84 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 RNU1-140P-201ENST00000365040 165 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 U1.1-201ENST00000384101 164 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 Y_RNA.455-201ENST00000384230 98 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 RNU6-843P-201ENST00000384454 104 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AC007098.1-201ENST00000420122 367 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AC092423.1-201ENST00000430165 186 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.8□□□□□ -1.8
CDC6Q99741 CYCSP35-201ENST00000451978 304 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC6Q99741 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC6Q99741 AP002884.2-201ENST00000471647 395 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AP001025.1-201ENST00000486139 332 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC6Q99741 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.8□□□□□ -1.8
CDC6Q99741 AC091874.1-201ENST00000511402 339 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.8□□□□□ -1.8
CDC6Q99741 MRPS36P4-201ENST00000534436 298 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AL117187.1-201ENST00000555482 181 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC6Q99741 MIR5187-201ENST00000583479 76 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AC087588.2-201ENST00000617667 426 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 MIR7975-201ENST00000619350 68 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 AL078596.1-201ENST00000624856 447 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 MIR3529-201ENST00000637713 78 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC6Q99741 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC6Q99741 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
CDC6Q99741 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC6Q99741 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC6Q99741 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC6Q99741 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDC6Q99741 MIR218-2-201ENST00000385006 110 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 MIR548F4-201ENST00000408515 105 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 RNU2-49P-201ENST00000410666 184 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AC245291.1-201ENST00000419501 328 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC6Q99741 MTCO3P29-201ENST00000432119 779 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AL513124.1-201ENST00000450410 614 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 RN7SKP210-201ENST00000459176 261 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.79□□□□□ -1.8
CDC6Q99741 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AC017037.1-201ENST00000508460 471 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC6Q99741 HSBP1P1-201ENST00000555205 166 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.79□□□□□ -1.8
CDC6Q99741 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.79□□□□□ -1.8
CDC6Q99741 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC6Q99741 AC113195.1-201ENST00000579952 141 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.79□□□□□ -1.8
CDC6Q99741 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.79□□□□□ -1.8
CDC6Q99741 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDC6Q99741 ZNF72P-201ENST00000425869 1908 ntBASIC3.79□□□□□ -1.8
CDC6Q99741 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC6Q99741 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC6Q99741 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC6Q99741 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC6Q99741 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDC6Q99741 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC6Q99741 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDC6Q99741 HAUS6P2-201ENST00000433254 2404 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDC6Q99741 RNU6-874P-201ENST00000362390 105 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 Y_RNA.144-201ENST00000363521 113 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 RNA5SP399-201ENST00000364003 117 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 Y_RNA.389-201ENST00000383924 113 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDC6Q99741 RNU6-823P-201ENST00000391042 103 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 HMGB3P2-201ENST00000411913 584 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
CDC6Q99741 RPL23AP95-201ENST00000426806 265 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.78□□□□□ -1.8
CDC6Q99741 AC104619.4-201ENST00000510773 249 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 SNORD19.2-201ENST00000516978 73 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 Y_RNA.721-201ENST00000517207 102 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AC144568.1-201ENST00000520139 137 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDC6Q99741 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
CDC6Q99741 MIR5188-201ENST00000583467 113 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AC091152.3-201ENST00000604227 325 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AC006077.1-201ENST00000604746 343 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.78□□□□□ -1.8
CDC6Q99741 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.78□□□□□ -1.8
CDC6Q99741 GABRG2-229ENST00000641017 3628 ntBASIC3.78□□□□□ -1.8
CDC6Q99741 AC004944.1-201ENST00000517807 3059 ntBASIC3.77□□□□□ -1.81
CDC6Q99741 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.77□□□□□ -1.81
CDC6Q99741 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms