Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC068790.6-201ENST00000602558 258 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 RNU6-945P-201ENST00000383947 107 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 MIR605-201ENST00000385078 83 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 HMGN2P34-201ENST00000437647 269 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AC108729.1-201ENST00000487812 947 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AL049874.1-201ENST00000489560 388 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
COL12A1Q99715 AC068276.1-201ENST00000605793 379 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AL391597.1-201ENST00000618707 694 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AL158163.2-201ENST00000619110 700 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
COL12A1Q99715 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 RNY4P36-201ENST00000391116 96 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
COL12A1Q99715 SNORD75.1-201ENST00000408373 60 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AL135790.2-201ENST00000437701 267 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AC091874.1-201ENST00000511402 339 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 AC021739.1-201ENST00000559631 174 ntBASIC-0.03□□□□□ -2.41
COL12A1Q99715 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 RNU4-12P-201ENST00000365233 139 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC099677.1-201ENST00000420575 175 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AL353691.1-201ENST00000451332 387 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 RAB11AP2-201ENST00000545905 639 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 DUXAP1-201ENST00000556632 463 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AL138963.2-201ENST00000605137 226 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AP001596.2-201ENST00000608410 312 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 MIR6864-201ENST00000617935 70 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AL079343.1-201ENST00000572358 1771 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 MTND5P17-201ENST00000418405 1603 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC245047.7-201ENST00000440265 293 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL12A1Q99715 RPL7P43-201ENST00000478876 753 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 HMGB1P29-201ENST00000505659 499 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC004923.2-201ENST00000529649 369 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL12A1Q99715 AL022345.2-201ENST00000606307 135 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC098614.4-201ENST00000607601 462 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC110792.4-201ENST00000609843 298 ntBASIC-0.04□□□□□ -2.42
COL12A1Q99715 AC090625.1-201ENST00000357130 210 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 SNORA29-201ENST00000384183 140 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
COL12A1Q99715 U1.36-201ENST00000620684 176 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL360181.4-201ENST00000621752 134 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC027309.3-201ENST00000623419 351 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL513185.3-201ENST00000433335 1300 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 RNU5D-1-201ENST00000363299 116 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC096531.1-201ENST00000419107 107 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 PNRC2P1-201ENST00000423940 420 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 RNU6-420P-201ENST00000458780 107 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 snoU109.2-201ENST00000459316 135 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 IGJP1-201ENST00000522682 475 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC004584.2-201ENST00000570407 410 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 Z99571.1-201ENST00000636677 394 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 HNRNPDLP3-201ENST00000456745 380 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL136520.1-202ENST00000555494 763 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 MED28P6-201ENST00000558776 231 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 AL513534.2-201ENST00000603836 250 ntBASIC-0.05□□□□□ -2.42
COL12A1Q99715 RPS27P16-201ENST00000425758 201 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC109327.2-201ENST00000448339 378 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 SNORD126-201ENST00000459475 77 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 SNORA68.3-201ENST00000515906 83 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC023050.3-201ENST00000541142 333 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 AC018462.2-201ENST00000605375 395 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 U4atac.1-201ENST00000618345 95 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 uc_338.36-201ENST00000622331 158 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
COL12A1Q99715 RNU4-45P-201ENST00000365469 141 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 AL589994.1-201ENST00000404962 340 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
COL12A1Q99715 AL359385.1-201ENST00000456509 365 ntBASIC-0.06□□□□□ -2.42
COL12A1Q99715 FCF1P6-201ENST00000456841 595 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms