Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 Y_RNA.123-201ENST00000363338 102 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 SNORD35B-201ENST00000363660 87 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 Y_RNA.262-201ENST00000364641 102 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RNU6-339P-201ENST00000384310 107 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 Y_RNA.542-201ENST00000384641 111 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RNA5SP213-201ENST00000391031 106 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RNU6-603P-201ENST00000411403 107 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AL592045.1-201ENST00000429867 352 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RPS29P7-201ENST00000439662 171 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC234775.1-201ENST00000454247 670 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RNU6-953P-201ENST00000459154 107 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 RPL23AP45-201ENST00000476406 468 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 MIR892C-201ENST00000516410 77 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 MIR2355-201ENST00000517199 87 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC008694.2-201ENST00000517591 306 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 IFITM8P-201ENST00000522529 394 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC060766.3-201ENST00000591442 263 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 AL670379.2-201ENST00000604983 252 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 Y_RNA.802-201ENST00000614892 130 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 Z99571.1-201ENST00000636677 394 ntBASIC3.96□□□□□ -1.78
SLC38A3Q99624 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
SLC38A3Q99624 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 RNU6-961P-201ENST00000363893 105 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 RNA5SP267-201ENST00000364893 126 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 RNU6-211P-201ENST00000384047 107 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 RNU6-80P-201ENST00000384195 107 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 MIR554-201ENST00000384874 96 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AL391219.1-201ENST00000422570 483 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC090774.1-201ENST00000435925 246 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 HIGD1AP3-201ENST00000515857 278 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC023632.4-201ENST00000517783 191 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC034105.4-201ENST00000568304 277 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 MIR5692C2-201ENST00000577959 77 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 SRGNP1-201ENST00000603392 451 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC037487.3-201ENST00000606668 112 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC004852.3-201ENST00000614131 326 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 MIR6864-201ENST00000617935 70 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 snoU18.1-201ENST00000629629 71 ntBASIC3.95□□□□□ -1.78
SLC38A3Q99624 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC38A3Q99624 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC38A3Q99624 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC38A3Q99624 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC38A3Q99624 FAM91A3P-201ENST00000456826 2544 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC38A3Q99624 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
SLC38A3Q99624 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC38A3Q99624 Y_RNA.238-201ENST00000364441 102 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RNU4-11P-201ENST00000365287 132 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RNU6-146P-201ENST00000384602 108 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RNU6-21P-201ENST00000384710 107 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 Y_RNA.570-201ENST00000384750 101 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 SNORA48.7-201ENST00000391302 135 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RPS4XP3-201ENST00000398541 413 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 EBAG9P1-201ENST00000418955 543 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 PPP1R11P2-201ENST00000423543 382 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC38A3Q99624 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC38A3Q99624 AC016700.2-201ENST00000446011 156 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC38A3Q99624 U8.21-201ENST00000459536 136 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AP000870.1-201ENST00000472927 406 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AC010683.1-201ENST00000473673 378 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC38A3Q99624 AC146944.2-203ENST00000502493 354 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 AC139495.1-202ENST00000513164 354 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RNU7-175P-201ENST00000515915 61 ntBASIC3.94□□□□□ -1.78
SLC38A3Q99624 RNU6-659P-201ENST00000516454 104 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms