Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
CDCA3Q99618 AC093788.1-201ENST00000609356 927 ntBASIC2.54□□□□□ -2
CDCA3Q99618 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
CDCA3Q99618 AL161431.1-201ENST00000618966 4205 ntBASIC2.54□□□□□ -2
CDCA3Q99618 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDCA3Q99618 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 AL354685.2-201ENST00000448218 1447 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC010889.1-201ENST00000566193 2666 ntBASIC2.53□□□□□ -2
CDCA3Q99618 SNORD21-201ENST00000383953 95 ntBASIC2.53□□□□□ -2
CDCA3Q99618 SNORD70.1-201ENST00000391007 85 ntBASIC2.53□□□□□ -2
CDCA3Q99618 RNU6-192P-201ENST00000391253 100 ntBASIC2.53□□□□□ -2
CDCA3Q99618 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
CDCA3Q99618 RNU6-193P-201ENST00000410977 107 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 RPL7P37-201ENST00000425095 738 ntBASIC2.53□□□□□ -2
CDCA3Q99618 MTND3P21-201ENST00000433774 331 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 BTF3P15-201ENST00000455606 336 ntBASIC2.53□□□□□ -2
CDCA3Q99618 RPL23AP49-201ENST00000492925 468 ntBASIC2.53□□□□□ -2
CDCA3Q99618 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.53□□□□□ -2
CDCA3Q99618 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 AK6P1-201ENST00000540219 478 ntBASIC2.53□□□□□ -2
CDCA3Q99618 BNIP3P6-201ENST00000549284 499 ntBASIC2.53□□□□□ -2
CDCA3Q99618 HMGB1P33-201ENST00000563485 527 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.53□□□□□ -2
CDCA3Q99618 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 BNIP3P30-201ENST00000601184 574 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AL021997.1-201ENST00000605757 193 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
CDCA3Q99618 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.53□□□□□ -2
CDCA3Q99618 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
CDCA3Q99618 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CDCA3Q99618 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
CDCA3Q99618 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2.01
CDCA3Q99618 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU6-1280P-201ENST00000365211 107 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU6-393P-201ENST00000384475 107 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 MIR181A1-201ENST00000385026 110 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 MIR10A-201ENST00000385043 110 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 MIR181B1-201ENST00000385240 110 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CDCA3Q99618 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.52□□□□□ -2.01
CDCA3Q99618 AC016831.2-201ENST00000417179 352 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 PGBD4P6-201ENST00000421501 610 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.52□□□□□ -2.01
CDCA3Q99618 SRIP2-201ENST00000428470 166 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AL669831.1-202ENST00000428504 417 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AL627311.1-201ENST00000431514 115 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AL603825.1-201ENST00000438481 80 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 GTF2IP13-201ENST00000438487 386 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.52□□□□□ -2.01
CDCA3Q99618 AC092001.1-201ENST00000453012 261 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU6-261P-201ENST00000459506 102 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AC103975.1-201ENST00000482506 483 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.52□□□□□ -2.01
CDCA3Q99618 AC026436.1-201ENST00000510537 270 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.52□□□□□ -2.01
CDCA3Q99618 MRPS36P2-201ENST00000512569 299 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 LRRC34P2-201ENST00000514850 553 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU1-86P-201ENST00000516108 154 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 RNU1-107P-201ENST00000516617 154 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.52□□□□□ -2.01
CDCA3Q99618 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.52□□□□□ -2.01
CDCA3Q99618 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.52□□□□□ -2.01
CDCA3Q99618 TPRKBP2-201ENST00000565969 475 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 MIR5583-1-201ENST00000580941 59 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AC084782.3-201ENST00000612282 578 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 MIR6134-201ENST00000617606 109 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.52□□□□□ -2.01
CDCA3Q99618 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
CDCA3Q99618 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.52□□□□□ -2.01
CDCA3Q99618 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDCA3Q99618 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDCA3Q99618 RNU6-384P-201ENST00000364900 104 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 MIR518D-201ENST00000385014 87 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 SNORD37.1-201ENST00000390968 65 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AL606923.1-201ENST00000406616 190 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.51□□□□□ -2.01
CDCA3Q99618 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.51□□□□□ -2.01
CDCA3Q99618 AL353621.1-201ENST00000418219 243 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AL358075.3-201ENST00000426289 226 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.51□□□□□ -2.01
CDCA3Q99618 HMGB1P18-201ENST00000438801 619 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AL161651.1-201ENST00000440882 223 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 NDUFB1P2-201ENST00000449477 176 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 RNU7-180P-201ENST00000459240 63 ntBASIC2.51□□□□□ -2.01
CDCA3Q99618 AP000852.1-201ENST00000472460 573 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms