Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC093831.2-201ENST00000624393 3427 ntBASIC2.92□□□□□ -1.94
PKP4Q99569 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PKP4Q99569 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PKP4Q99569 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PKP4Q99569 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PKP4Q99569 MIR422A-201ENST00000362286 90 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 RNU6-43P-201ENST00000384302 107 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 Y_RNA.579-201ENST00000390939 94 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 RNU4-14P-201ENST00000410858 122 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 RPLP0P7-201ENST00000416050 667 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 BTF3L4P3-201ENST00000418879 476 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AL160275.3-201ENST00000423876 471 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC009414.1-201ENST00000427200 443 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AL669831.1-202ENST00000428504 417 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 AL591212.2-201ENST00000433923 257 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 CYCSP32-201ENST00000440548 321 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 BRK1P2-201ENST00000442875 223 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.91□□□□□ -1.94
PKP4Q99569 MTND4P19-201ENST00000446659 478 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.91□□□□□ -1.94
PKP4Q99569 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 MTND5P5-201ENST00000503764 376 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.91□□□□□ -1.94
PKP4Q99569 AC104136.1-201ENST00000512969 394 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC026241.1-201ENST00000517873 2142 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC007151.1-201ENST00000572774 483 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AL137843.1-201ENST00000605078 385 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 UCA1.1-201ENST00000620952 75 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AL359757.2-201ENST00000624309 274 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 AC134503.1-201ENST00000633048 54 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 MTND4LP32-201ENST00000636111 270 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.91□□□□□ -1.94
PKP4Q99569 HSPA8P4-201ENST00000511877 1920 ntBASIC2.91□□□□□ -1.94
PKP4Q99569 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKP4Q99569 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.94
PKP4Q99569 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
PKP4Q99569 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 SNORD116-11-201ENST00000383882 92 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 SNORD116-29-201ENST00000384516 83 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RNY4P36-201ENST00000391116 96 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPL21P75-201ENST00000396599 483 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 MIR450B-201ENST00000401182 78 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPL21P28-201ENST00000401418 483 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AL139039.1-201ENST00000401900 692 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 RPS12P24-201ENST00000412619 387 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AL513477.1-202ENST00000417061 214 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 RPL7P37-201ENST00000425095 738 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 FABP5P14-201ENST00000437273 393 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 MTND1P17-201ENST00000448961 204 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPL37P6-201ENST00000460682 294 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPL21P39-201ENST00000463605 483 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPL31P41-201ENST00000477967 372 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC087190.1-201ENST00000484462 480 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC093591.1-201ENST00000491435 481 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.9□□□□□ -1.95
PKP4Q99569 RPL21P16-201ENST00000495531 483 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RPS27P27-201ENST00000498779 255 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.9□□□□□ -1.95
PKP4Q99569 TBCAP3-201ENST00000512475 312 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RN7SKP24-201ENST00000515888 284 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 SNORA14.1-201ENST00000516113 141 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RNU6-1069P-201ENST00000516612 133 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 COPS8P3-201ENST00000526024 482 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AP005639.2-201ENST00000527592 928 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PKP4Q99569 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 IMMP1LP2-201ENST00000552954 492 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC020661.2-201ENST00000560114 134 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC025281.1-201ENST00000567026 265 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
PKP4Q99569 AC138761.3-201ENST00000579993 334 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AL670379.10-201ENST00000604330 253 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AL670379.9-201ENST00000605428 253 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PKP4Q99569 AC084781.2-201ENST00000615568 161 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 AC022418.1-201ENST00000624118 445 ntBASIC2.9□□□□□ -1.95
PKP4Q99569 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PKP4Q99569 MTND4P27-201ENST00000450813 1354 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PKP4Q99569 AL359693.1-201ENST00000614959 2407 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 Y_RNA.128-201ENST00000363391 112 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 Y_RNA.135-201ENST00000363439 95 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 SNORD56.5-201ENST00000364281 72 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 SNORD42.2-201ENST00000365570 69 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PKP4Q99569 AL360182.1-201ENST00000397433 468 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 MTCYBP4-201ENST00000401524 249 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.89□□□□□ -1.95
PKP4Q99569 AL139281.1-201ENST00000422120 335 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms