Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AL353778.1-201ENST00000603149 408 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 SNORA75.3-201ENST00000391231 150 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 RNU6-370P-201ENST00000411008 104 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 RPL7P30-201ENST00000420888 709 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AC104108.1-201ENST00000509930 412 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 AC005832.3-201ENST00000537929 631 ntBASIC-0.55□□□□□ -2.5
VPS13AQ96RL7 RNA5SP192-201ENST00000364404 120 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 RPS3AP24-201ENST00000407896 734 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 AC009310.1-201ENST00000414414 451 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 USP9YP21-201ENST00000420603 432 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 PDCD5P2-201ENST00000507570 312 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 SNORA31.8-201ENST00000516327 108 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 AC021749.1-201ENST00000604322 607 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 MTCYBP41-201ENST00000528913 1123 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 AP003399.1-201ENST00000637534 361 ntBASIC-0.56□□□□□ -2.5
VPS13AQ96RL7 AC092447.10-201ENST00000620607 1652 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC073261.1-201ENST00000429409 121 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 SNORA18.1-201ENST00000363418 128 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 SNORD12-201ENST00000391002 90 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 LRRC34P1-201ENST00000542742 915 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC100810.6-201ENST00000638068 285 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 RAD1P2-201ENST00000446414 663 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 HSPE1P22-201ENST00000456856 327 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 AC099842.1-201ENST00000619919 596 ntBASIC-0.57□□□□□ -2.5
VPS13AQ96RL7 USP9YP26-201ENST00000421008 661 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 USP9YP18-201ENST00000425912 695 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 USP9YP17-201ENST00000444617 696 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 MTCO3P2-201ENST00000457365 171 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 AC104136.1-201ENST00000512969 394 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 AP003400.5-201ENST00000624827 617 ntBASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.58□□□□□ -2.5
VPS13AQ96RL7 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 MRPL42P4-201ENST00000453267 443 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC112492.4-201ENST00000456549 352 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AP004371.1-201ENST00000525240 214 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC092325.1-201ENST00000566449 554 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AL138880.2-201ENST00000616214 239 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 MTND2P19-201ENST00000449129 1012 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC013267.1-201ENST00000458227 267 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 SNORD4A-201ENST00000459174 72 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC026782.1-201ENST00000512952 449 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 MTCO1P20-201ENST00000425366 358 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC084024.2-201ENST00000503480 791 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 AC064807.4-201ENST00000607201 407 ntBASIC-0.59□□□□□ -2.5
VPS13AQ96RL7 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 RNU2-7P-201ENST00000410794 178 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 RPS3AP1-201ENST00000413190 320 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 MTND4LP13-201ENST00000425022 298 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AC090578.1-201ENST00000604955 591 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AC006157.1-201ENST00000611750 366 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AC008498.1-201ENST00000613012 531 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 ELOCP10-201ENST00000440624 327 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 RNA5SP112-201ENST00000515937 99 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 ELOCP34-201ENST00000604436 327 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 AC010329.5-201ENST00000623497 2174 ntBASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
VPS13AQ96RL7 DAP3P1-201ENST00000441522 278 ntBASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.61□□□□□ -2.51
VPS13AQ96RL7 RNA5SP255-201ENST00000516370 107 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms