Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 TOMM20P4-201ENST00000427861 435 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 GPR143P-201ENST00000434155 205 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC079781.2-201ENST00000446424 169 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 SNORD42A-201ENST00000459584 64 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 RN7SL429P-201ENST00000479090 223 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 RN7SL489P-201ENST00000486185 223 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 RN7SL327P-201ENST00000488659 223 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC104806.1-201ENST00000508720 308 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 HSPE1P18-201ENST00000517602 280 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 OR5AL2P-201ENST00000532185 920 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC137800.2-201ENST00000574375 120 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 MIR98-201ENST00000606724 119 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 RN7SL853P-201ENST00000617250 223 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 AC008121.3-201ENST00000618726 433 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
VPS35Q96QK1 MTND5P17-201ENST00000418405 1603 ntBASIC2.08□□□□□ -2.08
VPS35Q96QK1 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 RNU6-622P-201ENST00000384272 103 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 MIR186-201ENST00000384988 86 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AL591034.2-201ENST00000402839 359 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 RN7SKP32-201ENST00000410167 303 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AL365400.1-201ENST00000431854 640 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 RPS6P15-201ENST00000431996 751 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC006026.2-201ENST00000457376 180 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 MTND3P7-201ENST00000474435 343 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AP001025.1-201ENST00000486139 332 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC091965.2-201ENST00000512324 613 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 RNU2-53P-201ENST00000516257 147 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 SNORA18.6-201ENST00000516792 115 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AP003072.2-201ENST00000527756 676 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC093249.1-201ENST00000567049 203 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 AC012414.6-201ENST00000568241 401 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 MIR3126-201ENST00000577443 74 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 NIFKP6-201ENST00000598115 845 ntBASIC2.07□□□□□ -2.08
VPS35Q96QK1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS35Q96QK1 SNORA62.1-201ENST00000364287 154 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 RNU6-116P-201ENST00000384042 109 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 OR6C66P-201ENST00000414917 930 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 AIMP1P2-201ENST00000425294 312 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC092447.3-201ENST00000426027 686 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 HMGB1P31-201ENST00000437242 427 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 RNA5SP269-201ENST00000459032 137 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 SNORA43.2-201ENST00000516652 128 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 SNORA31.23-201ENST00000517219 133 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC109329.1-201ENST00000518744 317 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AP002453.2-201ENST00000533503 320 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC073539.2-201ENST00000597113 165 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC025165.5-201ENST00000602802 578 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 SEPT7P9-203ENST00000604116 343 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC064872.1-201ENST00000604823 1072 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC098614.4-201ENST00000607601 462 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 uc_338.15-201ENST00000615470 191 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 RMST_4.1-201ENST00000616886 107 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AP000770.2-201ENST00000623694 100 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC120349.3-201ENST00000624377 529 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 U6.114-201ENST00000636407 96 ntBASIC2.06□□□□□ -2.08
VPS35Q96QK1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VPS35Q96QK1 RNU1-23P-201ENST00000363361 144 ntBASIC2.05□□□□□ -2.08
VPS35Q96QK1 RNU4-91P-201ENST00000364778 135 ntBASIC2.05□□□□□ -2.08
VPS35Q96QK1 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
VPS35Q96QK1 RNU6-108P-201ENST00000365558 107 ntBASIC2.05□□□□□ -2.08
VPS35Q96QK1 RAP1BP3-201ENST00000407180 549 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms