Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 snoU13.4-201ENST00000458916 104 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP180-201ENST00000516181 101 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 AP001328.1-201ENST00000528550 176 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 MIR4324-201ENST00000584846 72 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 MIR6738-201ENST00000619620 64 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU6-158P-201ENST00000517104 100 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AP003066.2-201ENST00000529375 555 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AC093023.1-201ENST00000547375 507 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 MIR518D-201ENST00000385014 87 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU6-370P-201ENST00000411008 104 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AC013267.1-201ENST00000458227 267 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AC069304.2-201ENST00000605154 435 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AL391597.1-201ENST00000618707 694 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP327-201ENST00000362494 101 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU6-546P-201ENST00000383991 107 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU2-36P-201ENST00000410361 191 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 MIR4431-201ENST00000579990 94 ntBASIC-0.17□□□□□ -2.44
CSMD1Q96PZ7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 CALM2P3-201ENST00000400429 449 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC092001.1-201ENST00000453012 261 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 RN7SKP5-201ENST00000517045 272 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 SNORA31.22-201ENST00000517204 135 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC004241.3-201ENST00000611728 517 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP219-201ENST00000390940 113 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC096531.1-201ENST00000419107 107 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 MTND4P20-201ENST00000424125 869 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 NRON-201ENST00000517270 370 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 CYP3A52P-201ENST00000563326 91 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC008088.1-201ENST00000580993 280 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AC068276.1-201ENST00000605793 379 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 AL355810.1-201ENST00000614629 552 ntBASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.18□□□□□ -2.44
CSMD1Q96PZ7 MIRLET7D-201ENST00000362263 87 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 SNORD12-201ENST00000391002 90 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC108729.1-201ENST00000487812 947 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC004062.1-201ENST00000509926 645 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 SNORA31.8-201ENST00000516327 108 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 DUXAP1-201ENST00000556632 463 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AL356432.3-201ENST00000568952 465 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 MIR200A-201ENST00000384875 90 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AL049545.1-201ENST00000401856 572 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC116347.2-201ENST00000514912 523 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC090888.2-201ENST00000559765 1144 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC092354.1-201ENST00000606057 376 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 Z99571.1-201ENST00000636677 394 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 RN7SKP277-201ENST00000516895 283 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 HSPA8P13-201ENST00000523715 472 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 MIR3609-201ENST00000582661 80 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AL357312.1-201ENST00000603879 298 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 U4atac.1-201ENST00000618345 95 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 AC116563.2-201ENST00000624751 535 ntBASIC-0.19□□□□□ -2.44
CSMD1Q96PZ7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP125-201ENST00000364843 120 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC243964.1-201ENST00000441814 261 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 MTCO1P44-201ENST00000441935 243 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC010900.2-201ENST00000604508 210 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC090578.1-201ENST00000604955 591 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC093838.1-201ENST00000613014 469 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 RPS27P16-201ENST00000425758 201 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC098869.1-201ENST00000481627 292 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 RNY4-201ENST00000516507 96 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 BX284668.6-201ENST00000606899 438 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AC104651.1-201ENST00000427559 735 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 AL133370.2-201ENST00000619934 439 ntBASIC-0.2□□□□□ -2.44
CSMD1Q96PZ7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
CSMD1Q96PZ7 RNU6-748P-201ENST00000384648 107 ntBASIC-0.21□□□□□ -2.44
CSMD1Q96PZ7 SNORA12.1-201ENST00000390873 148 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms