Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DEFB108F-201ENST00000344638 222 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-227P-201ENST00000362865 103 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 SNORD81.1-201ENST00000363064 77 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC115115.1-201ENST00000449927 248 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC079354.2-201ENST00000453523 154 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RPS26P15-201ENST00000488067 348 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC139453.3-201ENST00000493276 369 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RNU4-60P-201ENST00000517239 135 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RPL23AP78-201ENST00000599928 470 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 MIR4727-201ENST00000622232 55 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC006065.5-201ENST00000623427 349 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 AL365440.1-201ENST00000436135 2167 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 SNORD113-8-201ENST00000363497 74 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-926P-201ENST00000384075 107 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-187P-201ENST00000384139 106 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-937P-201ENST00000384325 106 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 Y_RNA.541-201ENST00000384640 113 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 AL079342.1-201ENST00000401460 267 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 RPS29P13-201ENST00000402041 169 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 MIR1251-201ENST00000408552 70 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 U8.22-201ENST00000459141 133 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 SNORA31.19-201ENST00000517079 126 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 SNORA31.20-201ENST00000517111 133 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 MIR3133-201ENST00000583157 78 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 AC136601.2-201ENST00000604356 474 ntBASIC4.43□□□□□ -1.7
SYNGAP1Q96PV0 ZNF962P-201ENST00000443465 3140 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 Y_RNA.199-201ENST00000364014 102 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-629P-201ENST00000384061 103 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-746P-201ENST00000384112 109 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AL445305.1-201ENST00000432577 575 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AL392103.1-201ENST00000447000 198 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 Y_RNA.644-201ENST00000459006 113 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 RPL21P13-201ENST00000488305 481 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 Y_RNA.674-201ENST00000516362 113 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-572P-201ENST00000516724 80 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AP004371.1-201ENST00000525240 214 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC024405.2-202ENST00000532731 184 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC010186.2-204ENST00000537668 439 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC104581.2-201ENST00000572227 430 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 MIR3945-201ENST00000581853 98 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 MIR5187-201ENST00000583479 76 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AL645944.1-201ENST00000603857 493 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 ZNF826P-207ENST00000622273 1910 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 AC127459.3-201ENST00000624328 466 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 MAPK10-253ENST00000641010 4072 ntBASIC4.42□□□□□ -1.7
SYNGAP1Q96PV0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AC004925.1-201ENST00000624256 2706 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 MIR128-1-201ENST00000384921 82 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AL033519.2-201ENST00000403958 392 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 SNORA3C-201ENST00000408792 125 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 HIGD1AP2-201ENST00000446367 280 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 FABP5P15-201ENST00000453566 214 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 RN7SL293P-201ENST00000481765 281 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AC026784.1-201ENST00000507986 352 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 IGKV2-38-201ENST00000517443 247 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AP002770.2-201ENST00000543613 532 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AC005476.1-201ENST00000554427 397 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 MIR4659A-201ENST00000580269 81 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 BRDTP1-201ENST00000605735 677 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 U3.45-201ENST00000607547 219 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 AC240442.1-201ENST00000616055 283 ntBASIC4.41□□□□□ -1.7
SYNGAP1Q96PV0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms