Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-336P-201ENST00000364891 107 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RNU6-622P-201ENST00000384272 103 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RPL21P111-201ENST00000418453 477 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 RPS15AP10-201ENST00000432472 382 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 IFNA20P-201ENST00000436840 528 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 MTND4LP16-201ENST00000440828 295 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RNU6-1037P-201ENST00000459571 107 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC092436.3-201ENST00000511788 257 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RNA5SP112-201ENST00000515937 99 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 RNU4-49P-201ENST00000516080 140 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 MIR3672-201ENST00000584290 82 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 VN1R107P-201ENST00000601784 209 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AL137843.1-201ENST00000605078 385 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AL157817.1-201ENST00000614264 790 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
CCDC138Q96M89 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC138Q96M89 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC138Q96M89 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 CBX3P1-201ENST00000325243 554 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 Y_RNA.390-201ENST00000383932 102 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC138393.2-201ENST00000414742 246 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC138623.1-201ENST00000418060 216 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 MTCO3P46-201ENST00000425787 232 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 MICF-203ENST00000432679 129 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 SNORA59A-201ENST00000459326 152 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC074250.1-201ENST00000511117 192 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC104576.1-201ENST00000524225 88 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 COX6CP5-201ENST00000527162 228 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC118273.2-201ENST00000532092 465 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AP000889.2-201ENST00000532684 490 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC087241.2-201ENST00000535801 324 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 BNIP3P16-201ENST00000589779 534 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 ELOCP5-201ENST00000604924 333 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC064836.2-201ENST00000609491 462 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AL138726.1-201ENST00000614873 333 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC244517.12-201ENST00000623581 663 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 AC097372.5-201ENST00000623665 376 ntBASIC3.19□□□□□ -1.9
CCDC138Q96M89 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC138Q96M89 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 SNORD114-19-201ENST00000363072 75 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 Y_RNA.111-201ENST00000363248 100 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 Y_RNA.279-201ENST00000364763 95 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 RNU6-767P-201ENST00000384132 107 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 RNU6-1328P-201ENST00000410938 106 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 RNU6-293P-201ENST00000411259 106 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC097463.2-201ENST00000421074 142 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC138Q96M89 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 RPS15AP7-201ENST00000439294 405 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC007969.2-201ENST00000441891 191 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 RPL32P28-201ENST00000443577 397 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 MTND3P10-201ENST00000450967 341 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC046134.1-201ENST00000514454 666 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC026241.1-201ENST00000517873 2142 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC079598.5-201ENST00000547460 117 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC105137.2-201ENST00000569073 466 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 MIR3942-201ENST00000585264 109 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC078899.3-201ENST00000599065 212 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC005046.1-201ENST00000608515 625 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
CCDC138Q96M89 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC138Q96M89 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC138Q96M89 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC138Q96M89 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms