Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 MIR5697-201ENST00000578045 78 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AF131215.7-201ENST00000602443 707 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AL031775.1-201ENST00000607014 887 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 RNU6-87P-201ENST00000607561 108 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AL050303.3-201ENST00000613704 284 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AC092140.2-201ENST00000618027 521 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AC024940.5-201ENST00000622889 474 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.84□□□□□ -2.11
PKNOX2Q96KN3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC016831.2-201ENST00000417179 352 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC009518.2-201ENST00000418056 731 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC137499.1-201ENST00000427602 88 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL583843.1-201ENST00000456070 346 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 MTCO2P29-201ENST00000465212 189 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 RPL9P6-201ENST00000492764 598 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC010486.1-201ENST00000511793 424 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC092325.1-201ENST00000566449 554 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC025678.1-201ENST00000567861 338 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL713866.2-201ENST00000603579 219 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL670379.2-201ENST00000604983 252 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL670379.4-201ENST00000605279 254 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC096772.1-201ENST00000609146 564 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AL359547.2-201ENST00000615810 418 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC092656.1-203ENST00000624134 423 ntBASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.83□□□□□ -2.12
PKNOX2Q96KN3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 MIR26B-201ENST00000362251 77 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AL365338.1-201ENST00000422282 858 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC010587.1-201ENST00000505809 469 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 HSPE1P18-201ENST00000517602 280 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AP003181.2-201ENST00000528941 181 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC136619.2-201ENST00000563361 631 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 MIR4435-1-201ENST00000582552 80 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 MIR4672-201ENST00000583126 81 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AP001485.1-201ENST00000604799 199 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC138749.5-201ENST00000611461 208 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 MIR7844-201ENST00000616161 122 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 AC116165.2-201ENST00000616705 206 ntBASIC1.82□□□□□ -2.12
PKNOX2Q96KN3 MIR412-201ENST00000362142 91 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 RNU11-3P-201ENST00000391111 133 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 MTCYBP36-201ENST00000404146 440 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC007098.1-201ENST00000420122 367 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC119618.1-201ENST00000434191 222 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 MED28P2-201ENST00000475771 317 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AP001372.4-201ENST00000524889 472 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 AC009878.1-201ENST00000621819 340 ntBASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PKNOX2Q96KN3 RNU6-858P-201ENST00000362436 107 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 SNORD114-19-201ENST00000363072 75 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 RNU6-39P-201ENST00000384344 107 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AL079342.1-201ENST00000401460 267 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 MRPL42P2-201ENST00000403169 426 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AL593851.1-201ENST00000426171 157 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AP000797.1-201ENST00000478870 387 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 AC027807.2-201ENST00000616099 408 ntBASIC1.8□□□□□ -2.12
PKNOX2Q96KN3 RNU4-82P-201ENST00000362443 140 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms