Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CYP2C59P-201ENST00000457790 269 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USP47Q96K76 Y_RNA.689-201ENST00000516589 107 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 RNU6-1315P-201ENST00000517187 99 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.91□□□□□ -2.1
USP47Q96K76 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.91□□□□□ -2.1
USP47Q96K76 AC068338.1-201ENST00000565567 176 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 MIR3118-1-201ENST00000581787 76 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 MIR3660-201ENST00000584845 100 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 MIR15A-201ENST00000607334 83 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
USP47Q96K76 AC091895.1-201ENST00000624494 256 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
USP47Q96K76 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USP47Q96K76 Y_RNA.97-201ENST00000363094 102 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 RNU6-960P-201ENST00000364056 120 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 RNU6-166P-201ENST00000384371 107 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 RNU6-809P-201ENST00000384461 107 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 FTH1P15-201ENST00000406984 280 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.9□□□□□ -2.11
USP47Q96K76 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.9□□□□□ -2.11
USP47Q96K76 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.9□□□□□ -2.11
USP47Q96K76 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.9□□□□□ -2.11
USP47Q96K76 SNRPGP13-201ENST00000442212 177 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.9□□□□□ -2.11
USP47Q96K76 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.9□□□□□ -2.11
USP47Q96K76 RNU6-311P-201ENST00000516224 102 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 Y_RNA.670-201ENST00000516255 105 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
USP47Q96K76 AC025678.1-201ENST00000567861 338 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.9□□□□□ -2.11
USP47Q96K76 AC174048.1-201ENST00000603389 144 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC107952.2-201ENST00000606048 486 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC144521.1-201ENST00000607148 956 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 AP002782.1-201ENST00000623107 614 ntBASIC1.9□□□□□ -2.11
USP47Q96K76 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
USP47Q96K76 RNU6-858P-201ENST00000362436 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 SNORD114-22-201ENST00000365423 72 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-1-201ENST00000383898 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-42P-201ENST00000384165 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-36P-201ENST00000384172 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-4P-201ENST00000384205 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-5P-201ENST00000384238 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-3P-201ENST00000384314 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-2-201ENST00000384627 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-9-201ENST00000384776 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-33P-201ENST00000384793 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.89□□□□□ -2.11
USP47Q96K76 AL354941.1-201ENST00000438600 464 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.89□□□□□ -2.11
USP47Q96K76 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.89□□□□□ -2.11
USP47Q96K76 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.89□□□□□ -2.11
USP47Q96K76 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 MTND4LP18-201ENST00000526864 291 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.89□□□□□ -2.11
USP47Q96K76 AL157871.3-201ENST00000557231 293 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AC012435.1-202ENST00000568772 240 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.89□□□□□ -2.11
USP47Q96K76 AL078603.1-201ENST00000603824 313 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 RNU6-6P-201ENST00000606623 107 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 MIR6078-201ENST00000611069 100 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
USP47Q96K76 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.89□□□□□ -2.11
USP47Q96K76 AL391994.1-201ENST00000254724 282 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USP47Q96K76 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 RNU6-584P-201ENST00000410350 95 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC016831.2-201ENST00000417179 352 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC009518.2-201ENST00000418056 731 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC007098.1-201ENST00000420122 367 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 RPS27AP14-201ENST00000422868 454 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.88□□□□□ -2.11
USP47Q96K76 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 RPL7P43-201ENST00000478876 753 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC034244.1-201ENST00000507687 207 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 SNORA31.23-201ENST00000517219 133 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC022616.6-201ENST00000520479 119 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AP003033.1-201ENST00000527244 415 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.88□□□□□ -2.11
USP47Q96K76 AC136443.5-201ENST00000603741 370 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 RNU6-91P-201ENST00000607774 107 ntBASIC1.88□□□□□ -2.11
USP47Q96K76 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.88□□□□□ -2.11
USP47Q96K76 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USP47Q96K76 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AC074117.2-201ENST00000417130 397 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AL008629.1-201ENST00000438615 184 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms