Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS50Q96JG6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 MIR4782-201ENST00000577987 79 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 ATP5A1P2-202ENST00000616464 443 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC126177.8-201ENST00000618339 1015 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC010378.1-201ENST00000619270 362 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC022336.2-201ENST00000568966 2538 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS50Q96JG6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS50Q96JG6 RNU6-1188P-201ENST00000363795 107 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 Y_RNA.482-201ENST00000384377 111 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 RNY4P36-201ENST00000391116 96 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 RNA5SP120-201ENST00000410900 112 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AL354751.2-201ENST00000415471 210 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 ATG3P1-201ENST00000419507 911 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC236972.2-201ENST00000434979 310 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC098831.1-201ENST00000440661 216 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AL031274.1-201ENST00000450334 232 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC005741.1-201ENST00000511094 432 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC007458.1-201ENST00000542812 373 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 AL161756.2-201ENST00000604597 246 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC124303.1-201ENST00000605703 360 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS50Q96JG6 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
VPS50Q96JG6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS50Q96JG6 SNORD62.1-201ENST00000362541 86 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RNU6-43P-201ENST00000384302 107 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 MIR518D-201ENST00000385014 87 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 MTCYBP4-201ENST00000401524 249 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 UBE2V1P4-201ENST00000425374 344 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC010099.1-201ENST00000455434 375 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 MTCO3P10-201ENST00000455912 772 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 RPS26P21-201ENST00000475397 348 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC116337.1-201ENST00000509680 687 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC113155.1-201ENST00000511141 769 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC026782.1-201ENST00000512952 449 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC008121.1-201ENST00000603244 268 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL160281.1-201ENST00000605307 311 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL161423.1-201ENST00000613700 262 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AL161629.2-201ENST00000615347 275 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC007742.2-201ENST00000618226 398 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC244517.12-201ENST00000623581 663 ntBASIC3.21□□□□□ -1.9
VPS50Q96JG6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
VPS50Q96JG6 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC032011.1-201ENST00000611703 1549 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AP003122.5-201ENST00000527668 3766 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC093831.2-201ENST00000624393 3427 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 Y_RNA.132-201ENST00000363421 102 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 RNU6-72P-201ENST00000384285 79 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 RPL26P27-201ENST00000414397 437 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 MTCO2P27-201ENST00000420740 428 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 USP9YP30-201ENST00000430729 455 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 MTATP6P7-201ENST00000453315 681 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS50Q96JG6 Y_RNA.670-201ENST00000516255 105 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 RNU6-1016P-201ENST00000516689 94 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS50Q96JG6 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 TRAV32-201ENST00000553993 340 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC103996.1-201ENST00000555468 102 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC093249.1-201ENST00000567049 203 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms