Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AC110491.1-201ENST00000562191 2010 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.11-201ENST00000362375 109 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 SNORA38.1-201ENST00000364172 131 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 U3.37-201ENST00000408528 213 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 SNORA11-201ENST00000408789 128 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 MIR1289-1-201ENST00000408836 144 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 RN7SKP158-201ENST00000410453 326 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AL365496.1-201ENST00000426885 215 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AC008739.2-201ENST00000597006 317 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 MIR6134-201ENST00000617606 109 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AC022140.2-201ENST00000623500 188 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 SCARNA4-202ENST00000625402 129 ntBASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CDK5RAP3Q96JB5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 ADAM3A-203ENST00000461344 2157 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC099654.7-201ENST00000635788 2127 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 RNU4-79P-201ENST00000362764 141 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 RNU5E-7P-201ENST00000365290 117 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.387-201ENST00000383918 102 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 RNU4-14P-201ENST00000410858 122 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 ATG3P1-201ENST00000419507 911 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 RPL23AP22-201ENST00000437556 453 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 HIGD1AP2-201ENST00000446367 280 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 UBE2V1P7-201ENST00000446395 340 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC113155.1-201ENST00000511141 769 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-56P-201ENST00000516986 93 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 MIR4506-201ENST00000584693 77 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC020895.1-201ENST00000595362 272 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AL121917.1-203ENST00000605534 577 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 MIR6128-201ENST00000615528 109 ntBASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP3Q96JB5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC092435.3-201ENST00000565538 3654 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 SNORA7.4-201ENST00000384249 137 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.535-201ENST00000384612 99 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC245054.2-201ENST00000415639 319 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC009414.1-201ENST00000427200 443 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 FABP5P14-201ENST00000437273 393 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 HMGN2P10-201ENST00000448085 265 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-559P-201ENST00000516151 98 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC021739.1-201ENST00000559631 174 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AP000787.2-201ENST00000604432 568 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC011890.2-201ENST00000613393 294 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AC010378.1-201ENST00000619270 362 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 AL359757.2-201ENST00000624309 274 ntBASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDK5RAP3Q96JB5 U3.6-201ENST00000363622 211 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-694P-201ENST00000364071 147 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-827P-201ENST00000365553 106 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 SNORD21-201ENST00000383953 95 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-1106P-201ENST00000390845 107 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 SAR1AP4-201ENST00000429225 591 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNU7-187P-201ENST00000458985 68 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 Y_RNA.632-201ENST00000459189 102 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNA5SP385-201ENST00000515947 110 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RNU6-581P-201ENST00000516214 105 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 RN7SKP272-201ENST00000516988 232 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC109479.2-201ENST00000517842 174 ntBASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.47□□□□□ -1.85
CDK5RAP3Q96JB5 AP004607.1-201ENST00000524456 203 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms