Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 MIR454-201ENST00000390180 115 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 RNU6-550P-201ENST00000391057 101 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 RNU2-3P-201ENST00000410144 191 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC096920.1-201ENST00000423991 241 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 SNRPGP9-201ENST00000456025 225 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 PMCHL2-203ENST00000457791 237 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 RNU7-182P-201ENST00000459009 62 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 MRPS17P9-201ENST00000511924 393 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.32□□□□□ -2.04
VMP1Q96GC9 RN7SKP256-201ENST00000517201 314 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 CYCSP27-201ENST00000527643 293 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC245014.2-201ENST00000603689 287 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC246785.4-201ENST00000605374 287 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 AC243829.7-201ENST00000633081 225 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.32□□□□□ -2.04
VMP1Q96GC9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 RNA5SP456-201ENST00000364002 114 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VMP1Q96GC9 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 MIR29B2-201ENST00000385055 81 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 SNORA26.8-201ENST00000391306 124 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL162578.1-201ENST00000406202 378 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 GSTA9P-201ENST00000406231 611 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 CYCSP33-201ENST00000414485 327 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 USP9YP18-201ENST00000425912 695 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL445567.1-201ENST00000439121 144 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL022238.1-201ENST00000442557 355 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 RPL39P29-201ENST00000447779 157 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 RPL30P1-201ENST00000488676 339 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC117532.1-201ENST00000514638 323 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 SNORA18.6-201ENST00000516792 115 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 MIR4775-201ENST00000581168 75 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 CLIC4P2-201ENST00000601934 717 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC005034.5-201ENST00000604219 466 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 Z82243.1-201ENST00000609432 473 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 AL159153.1-201ENST00000619688 317 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 SEPT14P19-203ENST00000633205 211 ntBASIC2.31□□□□□ -2.04
VMP1Q96GC9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VMP1Q96GC9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.31□□□□□ -2.04
VMP1Q96GC9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VMP1Q96GC9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VMP1Q96GC9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 FGF7P2-201ENST00000332473 296 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 RNU4-91P-201ENST00000364778 135 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 AL359511.1-201ENST00000402970 211 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 MTND2P18-201ENST00000419962 1030 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 AL353752.1-201ENST00000454946 260 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 RNU6-1178P-201ENST00000516674 107 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 AL136363.2-201ENST00000604173 851 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 Z84480.1-201ENST00000605131 311 ntBASIC2.3□□□□□ -2.04
VMP1Q96GC9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.3□□□□□ -2.04
VMP1Q96GC9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VMP1Q96GC9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VMP1Q96GC9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 RNU6-297P-201ENST00000384636 107 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 AL139413.1-201ENST00000421309 217 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC245102.2-201ENST00000448956 180 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC010486.1-201ENST00000511793 424 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC060788.1-201ENST00000521318 469 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms