Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU6-884P-201ENST00000363889 107 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RNU6-1145P-201ENST00000384246 107 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RNU6-1289P-201ENST00000384431 106 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 Y_RNA.570-201ENST00000384750 101 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 MIR659-201ENST00000384963 97 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 HLFP1-201ENST00000402375 499 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RPL23AP48-201ENST00000406913 488 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AP001025.1-201ENST00000486139 332 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RPS26P15-201ENST00000488067 348 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RN7SL810P-201ENST00000493031 276 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 MTND5P41-201ENST00000517498 206 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 UBL5P4-201ENST00000562584 236 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AC108706.1-201ENST00000611053 297 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.53□□□□□ -1.69
IFT43Q96FT9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 Y_RNA.418-201ENST00000384029 102 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 MIR544A-201ENST00000384855 91 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 GPM6BP3-201ENST00000442797 145 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 SNRPGP7-201ENST00000469016 106 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 HSPE1P4-201ENST00000550617 308 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 AL391261.3-201ENST00000557194 520 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 AC104465.1-201ENST00000611365 139 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
IFT43Q96FT9 AC087190.4-201ENST00000574616 8334 ntBASIC4.52□□□□□ -1.69
IFT43Q96FT9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
IFT43Q96FT9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
IFT43Q96FT9 NOL8P1-201ENST00000508336 3529 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
IFT43Q96FT9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
IFT43Q96FT9 RNA5SP151-201ENST00000365632 117 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RNU1-44P-201ENST00000384453 163 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RNU6-1117P-201ENST00000384525 104 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 MIR607-201ENST00000385241 96 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 MIR888-201ENST00000401186 77 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RPS20P14-201ENST00000412545 360 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RPL7AP25-201ENST00000423357 805 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 AL358075.3-201ENST00000426289 226 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 VDAC1P3-201ENST00000434069 851 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 SNORD2.1-201ENST00000458762 69 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RN7SL303P-201ENST00000469773 251 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 RPS4XP22-201ENST00000480755 780 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 AC016632.1-201ENST00000503994 196 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 AP005660.1-201ENST00000522972 293 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.51□□□□□ -1.69
IFT43Q96FT9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.51□□□□□ -1.69
IFT43Q96FT9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
IFT43Q96FT9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
IFT43Q96FT9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
IFT43Q96FT9 AC010733.2-201ENST00000589496 5702 ntBASIC4.51□□□□□ -1.69
IFT43Q96FT9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
IFT43Q96FT9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.5□□□□□ -1.69
IFT43Q96FT9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
IFT43Q96FT9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.5□□□□□ -1.69
IFT43Q96FT9 AC011266.1-201ENST00000624119 3569 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-600P-201ENST00000362524 99 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 SNORD115-8-201ENST00000363856 82 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-961P-201ENST00000363893 105 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-1141P-201ENST00000364520 107 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-923P-201ENST00000364753 107 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 SNORD115-38-201ENST00000365037 82 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 Y_RNA.398-201ENST00000383952 99 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 MIR487A-201ENST00000385009 80 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 FTH1P15-201ENST00000406984 280 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 RNU6-1135P-201ENST00000411083 103 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.5□□□□□ -1.69
IFT43Q96FT9 RPL23AP36-201ENST00000413895 458 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 AC011998.1-201ENST00000433403 117 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 POLR2KP2-201ENST00000438155 177 ntBASIC4.5□□□□□ -1.69
IFT43Q96FT9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms