Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNA5SP323-201ENST00000391094 133 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNU2-7P-201ENST00000410794 178 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 MTCO3P19-201ENST00000415864 321 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RN7SL675P-201ENST00000478498 297 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNU6-911P-201ENST00000516523 104 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 ELOCP31-201ENST00000540463 467 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AC008749.1-201ENST00000597650 306 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AL117336.2-201ENST00000602435 335 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.15-201ENST00000611544 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.16-201ENST00000613119 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.12-201ENST00000613778 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.20-201ENST00000613956 192 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.9-201ENST00000615427 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.11-201ENST00000616345 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.2-201ENST00000616535 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.3-201ENST00000617785 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.19-201ENST00000618602 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 RNU2-1-201ENST00000618664 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.1-201ENST00000618978 145 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.6-201ENST00000619225 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.5-201ENST00000619465 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 U2.10-201ENST00000620268 191 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC2.34□□□□□ -2.03
SVIPQ8NHG7 MIR338-201ENST00000636369 67 ntBASIC2.34□□□□□ -2.03
SVIPQ8NHG7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 KRTAP21-1-201ENST00000335093 599 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 RNA5SP489-201ENST00000410986 109 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AL359633.1-201ENST00000421403 310 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 LINC00403-201ENST00000421423 545 ntTSL 2 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC019185.3-201ENST00000438805 323 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC112492.4-201ENST00000456549 352 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 RNU6-625P-201ENST00000459412 107 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 RPL23AP42-201ENST00000471152 471 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC010343.2-201ENST00000510162 224 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC008958.1-201ENST00000511047 682 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 IGKV2-38-201ENST00000517443 247 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 IGHVIII-82-201ENST00000522058 250 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC018448.1-201ENST00000552843 316 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AL356458.1-201ENST00000604764 465 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AC116312.1-201ENST00000606841 314 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
SVIPQ8NHG7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
SVIPQ8NHG7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RNA5SP375-201ENST00000362975 119 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RNA5SP145-201ENST00000363124 125 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RNA5SP161-201ENST00000363871 115 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 SNORA43.1-201ENST00000364863 140 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RNA5SP149-201ENST00000364952 92 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 SNORA70.3-201ENST00000365075 132 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RNU6-417P-201ENST00000384712 107 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 MIR520A-201ENST00000384862 85 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AL139135.1-201ENST00000412675 209 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 Z82198.3-201ENST00000421145 199 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AC009238.2-201ENST00000431026 355 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AL355309.1-201ENST00000442158 78 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 RN7SL566P-201ENST00000467650 296 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.32□□□□□ -2.04
SVIPQ8NHG7 AC074250.1-201ENST00000511117 192 ntBASIC2.32□□□□□ -2.04
SVIPQ8NHG7 SNORA40.9-201ENST00000515895 93 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms