Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MTCO2P21-201ENST00000419780 677 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AL365400.1-201ENST00000431854 640 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 MTCO3P5-201ENST00000433620 714 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC087884.1-201ENST00000469738 328 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AL121594.1-201ENST00000475906 575 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC119751.4-201ENST00000507498 357 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC117532.1-201ENST00000514638 323 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RN7SKP256-201ENST00000517201 314 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC022616.8-201ENST00000533569 253 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 MTCYBP33-201ENST00000575007 1130 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 BNIP3P40-201ENST00000596017 556 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC012065.4-201ENST00000602445 679 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNU4-5P-201ENST00000607255 135 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AL359547.2-201ENST00000615810 418 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 U6.42-201ENST00000618440 107 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 AC093648.1-201ENST00000623546 606 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 SCARNA4-202ENST00000625402 129 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU6-942P-201ENST00000363002 107 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 Y_RNA.302-201ENST00000364997 102 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU6-157P-201ENST00000383957 107 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 SNORA75B-201ENST00000384053 137 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 U8.10-201ENST00000384260 133 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU6-622P-201ENST00000384272 103 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 MIR29B2-201ENST00000385055 81 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU6-1242P-201ENST00000391052 103 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU6-482P-201ENST00000391068 107 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 CBX3P9-201ENST00000402326 552 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 MIR1262-201ENST00000408276 93 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU2-23P-201ENST00000410545 195 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 SRIP3-201ENST00000413200 219 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AL513185.2-201ENST00000425543 193 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 HSPE1P21-201ENST00000438283 308 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RPL22P17-201ENST00000438729 315 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 NDUFB1P2-201ENST00000449477 176 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 snoU109.2-201ENST00000459316 135 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC008834.1-201ENST00000511612 175 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 RNU7-51P-201ENST00000516560 62 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC015720.1-201ENST00000565251 277 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC022254.1-201ENST00000567857 235 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 CLIC4P2-201ENST00000601934 717 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AL138889.2-201ENST00000603883 242 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC012360.2-201ENST00000609349 391 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC004908.3-201ENST00000610248 625 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AL132822.1-201ENST00000617063 513 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AC092192.1-201ENST00000633154 1018 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 AL445523.1-201ENST00000451184 1362 ntBASIC1.31□□□□□ -2.2
ZIC4Q8N9L1 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 OR4G2P-201ENST00000328113 903 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 RNU6-661P-201ENST00000362409 107 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 SNORD116-20-201ENST00000384529 92 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 MIR10A-201ENST00000385043 110 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 MIR122-201ENST00000385044 85 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 RNA5SP390-201ENST00000410191 113 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 USP9YP18-201ENST00000425912 695 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL360221.1-201ENST00000445989 335 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 MTND1P12-201ENST00000455231 147 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AC027575.1-201ENST00000481064 460 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 RN7SKP219-201ENST00000516825 296 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 SNORA44.1-201ENST00000517031 108 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AP005660.1-201ENST00000522972 293 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AP001004.1-201ENST00000582468 324 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL353778.1-201ENST00000603149 408 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 AL022345.1-201ENST00000607292 135 ntBASIC1.3□□□□□ -2.2
ZIC4Q8N9L1 Z82243.1-201ENST00000609432 473 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms