Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP003327.1-201ENST00000529684 127 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AP000763.2-201ENST00000540641 163 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC068790.6-201ENST00000602558 258 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC090578.1-201ENST00000604955 591 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AC007792.1-201ENST00000623023 402 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 AL590396.2-201ENST00000636511 1041 ntBASIC0.34□□□□□ -2.36
VPS8Q8N3P4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 RNU2-7P-201ENST00000410794 178 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 SKA2P1-201ENST00000425592 390 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AC013267.1-201ENST00000458227 267 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 HMGN1P10-201ENST00000474557 553 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 RNA5SP395-201ENST00000516567 118 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 SNORA70.22-201ENST00000517160 124 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AC079610.2-201ENST00000604818 690 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AC239868.4-201ENST00000608318 671 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 Z82243.1-201ENST00000609432 473 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 AC245060.5-201ENST00000610778 3293 ntBASIC0.33□□□□□ -2.36
VPS8Q8N3P4 RNU6-778P-201ENST00000363269 103 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 RNU6-878P-201ENST00000384578 110 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS8Q8N3P4 COX6CP6-201ENST00000490840 228 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
VPS8Q8N3P4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS8Q8N3P4 AP001893.2-201ENST00000526949 202 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 AL512310.8-201ENST00000550183 120 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS8Q8N3P4 MTCO1P23-201ENST00000415223 1526 ntBASIC0.32□□□□□ -2.36
VPS8Q8N3P4 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 RNU6-360P-201ENST00000390944 104 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.31□□□□□ -2.36
VPS8Q8N3P4 RPL26P27-201ENST00000414397 437 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC000111.3-201ENST00000433478 193 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC002545.1-201ENST00000592511 181 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC104465.1-201ENST00000611365 139 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AC107075.1-201ENST00000613695 314 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 AL159972.1-201ENST00000625150 448 ntBASIC0.31□□□□□ -2.36
VPS8Q8N3P4 RNU6-543P-201ENST00000362576 108 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 RNU1-96P-201ENST00000364163 162 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC114482.1-201ENST00000418010 247 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AL160314.1-201ENST00000490836 438 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 RNU6-491P-201ENST00000516099 110 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS8Q8N3P4 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AL360085.1-201ENST00000604713 532 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC004805.2-201ENST00000605382 482 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC112220.2-201ENST00000605513 533 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AL583856.2-201ENST00000606298 543 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC013476.2-201ENST00000614456 459 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 MIR6516-201ENST00000630554 81 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC119751.3-201ENST00000399720 670 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 PSMA6P3-201ENST00000428242 164 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 UBE2V1P8-201ENST00000437166 265 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 SNORD124-201ENST00000459577 104 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS8Q8N3P4 AC025423.5-201ENST00000550230 219 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 MIR4275-201ENST00000636486 87 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 U2.21-201ENST00000637295 81 ntBASIC0.3□□□□□ -2.36
VPS8Q8N3P4 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 RNU6-546P-201ENST00000383991 107 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 MIR19B1-201ENST00000384829 87 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 RNA5SP299-201ENST00000391203 116 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 RNU2-48P-201ENST00000410694 191 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 PPP1R11P2-201ENST00000423543 382 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AC010620.1-201ENST00000601088 1102 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS8Q8N3P4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 AC009950.2-201ENST00000636548 183 ntBASIC0.29□□□□□ -2.36
VPS8Q8N3P4 RNA5SP361-201ENST00000362686 118 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 Y_RNA.255-201ENST00000364581 97 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.28□□□□□ -2.37
VPS8Q8N3P4 RPS3AP1-201ENST00000413190 320 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.28□□□□□ -2.37
VPS8Q8N3P4 RNA5SP290-201ENST00000517133 127 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.28□□□□□ -2.37
VPS8Q8N3P4 RPL30P11-203ENST00000598995 310 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 AC079416.3-201ENST00000624479 549 ntBASIC0.28□□□□□ -2.37
VPS8Q8N3P4 MTND4P12-201ENST00000498999 1377 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms