Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC080128.1-201ENST00000474389 1917 ntBASIC2.09□□□□□ -2.08
C9orf40Q8IXQ3 MTND5P30-201ENST00000452896 1731 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-858P-201ENST00000362436 107 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC007064.1-201ENST00000412238 351 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL353193.1-201ENST00000421444 268 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 TOMM20P4-201ENST00000427861 435 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL669831.1-202ENST00000428504 417 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 Z98742.2-201ENST00000431564 187 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 FABP5P14-201ENST00000437273 393 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 GTF2IP13-201ENST00000438487 386 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL445687.1-201ENST00000439946 251 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 MTCO2P7-201ENST00000446518 666 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 MRPL42P6-201ENST00000486397 371 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC011005.2-201ENST00000487324 359 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC074344.1-201ENST00000512823 224 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 RN7SKP219-201ENST00000516825 296 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AP004607.1-201ENST00000524456 203 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AP005435.4-201ENST00000529514 284 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC135279.1-201ENST00000543493 504 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AC008121.1-201ENST00000603244 268 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL670379.10-201ENST00000604330 253 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL670379.9-201ENST00000605428 253 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL158209.2-201ENST00000619266 216 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
C9orf40Q8IXQ3 AL359854.1-201ENST00000614203 1594 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL139276.1-201ENST00000311910 1001 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.318-201ENST00000365131 97 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-996P-201ENST00000365438 107 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.381-201ENST00000365666 102 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-517P-201ENST00000384362 110 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-607P-201ENST00000411283 108 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MTCYBP8-201ENST00000422855 651 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 SNRPFP3-201ENST00000457792 225 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC107401.1-201ENST00000503426 685 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MTCO3P9-201ENST00000506989 781 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 IGLV3-17-201ENST00000519099 244 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC078814.3-201ENST00000553036 491 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MIR3199-1-201ENST00000582434 88 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MIR3616-201ENST00000584070 92 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC078795.2-201ENST00000602835 1252 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL356280.1-201ENST00000603614 379 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL136363.2-201ENST00000604173 851 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RMST_4.1-201ENST00000616886 107 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AL354950.2-201ENST00000617939 290 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC073534.2-201ENST00000620377 381 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC139792.3-201ENST00000623525 224 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 SCARNA4-202ENST00000625402 129 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MIR6863-201ENST00000636112 90 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 MTND4P27-201ENST00000450813 1354 ntBASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-552P-201ENST00000362869 119 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-942P-201ENST00000363002 107 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-393P-201ENST00000384475 107 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 Y_RNA.517-201ENST00000384551 106 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 MIR218-1-201ENST00000384999 110 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 SNORD70.1-201ENST00000391007 85 ntBASIC2.06□□□□□ -2.08
C9orf40Q8IXQ3 RNU6-1158P-201ENST00000391167 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms