Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF546Q86UE3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF546Q86UE3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF546Q86UE3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ZNF546Q86UE3 RNU6-78P-201ENST00000362897 107 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 SNORA67.4-201ENST00000384688 142 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 MIR483-201ENST00000385070 76 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RNU2-52P-201ENST00000410680 190 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RN7SKP142-201ENST00000411236 328 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 HMGB1P31-201ENST00000437242 427 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AL031667.1-201ENST00000440222 725 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RPL23AP3-201ENST00000453844 468 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC234781.5-201ENST00000508429 271 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 BNIP3P6-201ENST00000549284 499 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AC009314.1-201ENST00000603871 304 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 uc_338.15-201ENST00000615470 191 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 RMST_7.1-201ENST00000621935 268 ntBASIC1.79□□□□□ -2.12
ZNF546Q86UE3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZNF546Q86UE3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU1-23P-201ENST00000363361 144 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU6-7-201ENST00000364784 107 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU6-8-201ENST00000365467 107 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU6-45P-201ENST00000384471 107 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 MIR196B-201ENST00000384852 84 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 HMGN2P39-201ENST00000398005 273 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU2-23P-201ENST00000410545 195 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 OR9R1P-201ENST00000412200 877 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 CYCSP33-201ENST00000414485 327 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC074117.2-201ENST00000417130 397 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 BX295541.1-201ENST00000417774 250 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL596276.1-201ENST00000434465 418 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 MTND2P4-201ENST00000445034 1004 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 MTND1P27-201ENST00000451117 902 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RPS29P15-201ENST00000458329 171 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNU7-182P-201ENST00000459009 62 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL121594.1-201ENST00000475906 575 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC018868.1-201ENST00000491307 315 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 RNA5SP503-201ENST00000517047 117 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC007834.2-201ENST00000536310 343 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 GTF3AP2-201ENST00000557014 266 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 MIR3913-1-201ENST00000577744 102 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL590229.1-201ENST00000603497 542 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC109347.2-201ENST00000610220 349 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 AC073114.1-201ENST00000612027 490 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 SEPT14P19-203ENST00000633205 211 ntBASIC1.78□□□□□ -2.12
ZNF546Q86UE3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ZNF546Q86UE3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ZNF546Q86UE3 RNU6-655P-201ENST00000362858 107 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 RNU6-715P-201ENST00000365204 103 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 SNORA25B-201ENST00000365507 128 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 RNU4-48P-201ENST00000365559 182 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 SNORA48.3-201ENST00000391081 134 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 RNA5SP390-201ENST00000410191 113 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 RNU4-46P-201ENST00000410818 138 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.77□□□□□ -2.13
ZNF546Q86UE3 PIGFP2-201ENST00000421400 651 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ZNF546Q86UE3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.77□□□□□ -2.13
ZNF546Q86UE3 AL669831.1-202ENST00000428504 417 ntBASIC1.77□□□□□ -2.13
ZNF546Q86UE3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms