Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNA5SP259-201ENST00000365541 109 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 RNU6-342P-201ENST00000384521 104 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 SNORD99-201ENST00000408612 74 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AC073614.1-201ENST00000438690 650 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AC097473.1-201ENST00000508142 408 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 IGJP1-201ENST00000522682 475 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AL356057.1-201ENST00000533798 831 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AL136520.1-202ENST00000555494 763 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 AL353997.4-201ENST00000586196 166 ntBASIC-0.18□□□□□ -2.44
LINC00643Q86TS7 SNORD114-19-201ENST00000363072 75 ntBASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 RNU6-670P-201ENST00000364312 104 ntBASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 MIR1289-2-201ENST00000408360 111 ntBASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 AC116655.1-201ENST00000508324 901 ntBASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
LINC00643Q86TS7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNU6-950P-201ENST00000384651 107 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNA5SP213-201ENST00000391031 106 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 VN1R42P-201ENST00000424651 344 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 FABP5P4-201ENST00000437203 171 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNU1-41P-201ENST00000516161 162 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RNU1-48P-201ENST00000516400 162 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 AP005212.4-201ENST00000614206 710 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 AL359740.1-201ENST00000624340 592 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 OR5AK4P-201ENST00000635912 903 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 AL590396.2-201ENST00000636511 1041 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 AC010615.1-201ENST00000594254 1764 ntBASIC-0.2□□□□□ -2.44
LINC00643Q86TS7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 RNA5SP387-201ENST00000364226 106 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 RNU1-39P-201ENST00000383897 165 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 RNU6-16P-201ENST00000384385 107 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 SNORA80D-201ENST00000384488 135 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 MTND5P14-201ENST00000441481 1267 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 RPL30P6-201ENST00000475925 342 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 HMGB1P30-201ENST00000492455 606 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AC108078.2-201ENST00000510750 236 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AC022861.1-201ENST00000522981 663 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 MIR924-201ENST00000638017 53 ntBASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC-0.21□□□□□ -2.44
LINC00643Q86TS7 MIR208A-201ENST00000362287 71 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 MIR186-201ENST00000384988 86 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 CALM2P3-201ENST00000400429 449 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 AC010153.1-201ENST00000432862 727 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 AC245047.7-201ENST00000440265 293 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 BRK1P2-201ENST00000442875 223 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 RNU6-491P-201ENST00000516099 110 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 AC008127.2-201ENST00000549925 1075 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 MTND5P16-201ENST00000460269 1703 ntBASIC-0.22□□□□□ -2.44
LINC00643Q86TS7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
LINC00643Q86TS7 RNU6-392P-201ENST00000364926 101 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 SNORA36.2-201ENST00000384004 127 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 RPS3AP37-201ENST00000419176 745 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 RPL31P35-201ENST00000431058 377 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 NEFMP1-201ENST00000443423 1006 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 AL031313.1-201ENST00000448435 256 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 OR6C5P-201ENST00000452388 923 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 RNU1-131P-201ENST00000458943 161 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 snoU13.27-201ENST00000459278 104 ntBASIC-0.23□□□□□ -2.45
LINC00643Q86TS7 RN7SKP256-201ENST00000517201 314 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms