Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RN7SL330P-201ENST00000469709 307 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC011005.2-201ENST00000487324 359 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC092436.3-201ENST00000511788 257 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC026782.1-201ENST00000512952 449 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNU1-86P-201ENST00000516108 154 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNU1-107P-201ENST00000516617 154 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 RNA5SP380-201ENST00000517190 98 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC022634.1-201ENST00000520765 532 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 TRAV37-201ENST00000553906 342 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC133104.2-201ENST00000615272 193 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 MIR6128-201ENST00000615528 109 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 MIR6852-201ENST00000621699 66 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 AC244517.12-201ENST00000623581 663 ntBASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
UBE3BQ7Z3V4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 SNORD62.1-201ENST00000362541 86 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 U3.6-201ENST00000363622 211 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 SNORA5B-201ENST00000363786 132 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.202-201ENST00000364083 110 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.422-201ENST00000384054 114 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 SNORA75.4-201ENST00000391278 119 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 RNA5SP274-201ENST00000410484 108 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AL137792.2-201ENST00000443484 235 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 RN7SKP132-201ENST00000516001 208 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 TRAV28-201ENST00000557548 323 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AL360085.1-201ENST00000604713 532 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AC018462.2-201ENST00000605375 395 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AP000654.2-201ENST00000605633 586 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 uc_338.22-201ENST00000622722 187 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AC007256.1-201ENST00000392253 2765 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 AC093908.1-201ENST00000623125 8092 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 MTND5P19-201ENST00000424872 1794 ntBASIC3.66□□□□□ -1.82
UBE3BQ7Z3V4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.65□□□□□ -1.82
UBE3BQ7Z3V4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
UBE3BQ7Z3V4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.65□□□□□ -1.82
UBE3BQ7Z3V4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 MIR412-201ENST00000362142 91 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 MIR148B-201ENST00000362252 99 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-738P-201ENST00000384531 106 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 MTND2P23-201ENST00000422990 651 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 HMGB1P9-201ENST00000429856 646 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AC009237.8-201ENST00000445492 379 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RPL30P15-201ENST00000457129 321 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 SNORD5.1-201ENST00000458800 75 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL163540.1-201ENST00000485382 386 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AC097473.1-201ENST00000508142 408 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU1-61P-201ENST00000516107 151 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-1045P-201ENST00000516321 107 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 MIR892C-201ENST00000516410 77 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNA5SP367-201ENST00000516557 118 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNA5SP290-201ENST00000517133 127 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU1-54P-201ENST00000517181 120 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 SNRPGP18-201ENST00000553000 214 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 GTF3AP2-201ENST00000557014 266 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-85P-201ENST00000605989 107 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 AL035425.3-201ENST00000564206 4996 ntBASIC3.65□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.216-201ENST00000364205 93 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 SNORA9.2-201ENST00000365361 133 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 SNORA33.2-201ENST00000365413 134 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 MIR606-201ENST00000384851 96 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 U3.42-201ENST00000408746 214 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 MIR1289-1-201ENST00000408836 144 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-293P-201ENST00000411259 106 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 PMCHL1-202ENST00000423102 261 ntBASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.64□□□□□ -1.83
UBE3BQ7Z3V4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms