Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 SNORA71B-202ENST00000439232 272 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 snoU109.2-201ENST00000459316 135 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 MTND4LP22-201ENST00000508209 276 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 SNORA74D-201ENST00000516404 141 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 SNORA62.6-201ENST00000606322 83 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 U3.45-201ENST00000607547 219 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 U6.105-201ENST00000637379 88 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 CUL1P1-201ENST00000509510 2425 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.106-201ENST00000363189 100 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 U3.6-201ENST00000363622 211 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-105P-201ENST00000363909 104 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-658P-201ENST00000384606 106 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 MIR183-201ENST00000384958 110 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AP000275.1-201ENST00000411943 390 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 MTND3P9-201ENST00000429526 346 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RPS3AP46-201ENST00000448352 682 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC079354.2-201ENST00000453523 154 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC010655.3-201ENST00000478818 450 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 SNORA43.2-201ENST00000516652 128 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 SNORA31.18-201ENST00000517043 134 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC091144.1-201ENST00000519573 138 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC040926.1-201ENST00000530195 238 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC011602.1-201ENST00000546484 331 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 NACAP3-201ENST00000552100 481 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 H3F3AP1-201ENST00000559984 334 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AMZ2P1-203ENST00000565833 850 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC006077.1-201ENST00000604746 343 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 MIR6134-201ENST00000617606 109 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 AC243829.7-201ENST00000633081 225 ntBASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RUFY4Q6ZNE9 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 HSPE1P26-201ENST00000405341 275 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 AC098831.1-201ENST00000440661 216 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 CHEK2P4-201ENST00000450340 246 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 AL590705.4-201ENST00000532209 134 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 AC006600.1-201ENST00000572529 153 ntBASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.15□□□□□ -1.75
RUFY4Q6ZNE9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 RNU4-50P-201ENST00000364361 141 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-450P-201ENST00000364654 107 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 SNORA69.1-201ENST00000390904 137 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 YPEL5P1-201ENST00000419731 367 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 FTH1P6-201ENST00000430768 320 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 MTCO3P8-201ENST00000453691 755 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 SNRPGP5-201ENST00000456003 220 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 RN7SL293P-201ENST00000481765 281 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 RN7SKP18-201ENST00000516005 275 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC131281.1-201ENST00000522984 164 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC110588.1-201ENST00000559699 137 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC104581.2-201ENST00000572227 430 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 MIR4644-201ENST00000579929 84 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 U2.1-201ENST00000618978 145 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC090617.7-201ENST00000623952 126 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 MTND5P7-201ENST00000413558 1798 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms