Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC092047.1-201ENST00000424997 240 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 EIF1P2-201ENST00000428233 350 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 OR4C10P-201ENST00000434991 931 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC005002.2-201ENST00000438228 269 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC006026.2-201ENST00000457376 180 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC087477.1-201ENST00000465747 340 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC107393.1-201ENST00000512403 346 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 MIR411-201ENST00000362239 96 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNU6-545P-201ENST00000362681 104 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNA5SP361-201ENST00000362686 118 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNU6-942P-201ENST00000363002 107 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 SNORD115-32-201ENST00000364079 82 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 SNORA7.2-201ENST00000364446 145 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNU6-746P-201ENST00000384112 109 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 SNORD63-201ENST00000384262 68 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 MIR518D-201ENST00000385014 87 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 MIR153-2-201ENST00000385225 87 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RPS4XP3-201ENST00000398541 413 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNU4-30P-201ENST00000410245 143 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AL512844.2-201ENST00000433990 593 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AL392103.1-201ENST00000447000 198 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 RNA5SP246-201ENST00000458909 119 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 CBX3P4-201ENST00000538909 354 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 PARP1P2-201ENST00000556806 195 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 MIR4697-201ENST00000582977 78 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 FTX_3.1-201ENST00000610451 147 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 AC090740.1-201ENST00000623193 2262 ntBASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF111Q6ZNA4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RN7SKP280-201ENST00000364196 304 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNORA70.2-201ENST00000364506 135 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC068538.1-201ENST00000376856 336 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RNU6-187P-201ENST00000384139 106 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNORD116-20-201ENST00000384529 92 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RNU6-541P-201ENST00000384709 110 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNORA53-201ENST00000391141 249 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RNU6-493P-201ENST00000391321 108 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RPS26P8-201ENST00000393490 348 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNORD12B-201ENST00000410433 91 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC098831.1-201ENST00000440661 216 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SSXP4-201ENST00000451349 245 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SNRPGP7-201ENST00000469016 106 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RPL7P49-201ENST00000471402 708 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC026726.1-201ENST00000512859 601 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 RNU6-255P-201ENST00000516957 105 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms