Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC022493.1-201ENST00000492984 337 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 SNORA40.12-201ENST00000516329 111 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 RNU6-314P-201ENST00000516574 104 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.693-201ENST00000516641 110 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 RNU6-572P-201ENST00000516724 80 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 SNORA31.19-201ENST00000517079 126 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC022634.1-201ENST00000520765 532 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AP005435.4-201ENST00000529514 284 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 ZNF519P2-201ENST00000557032 169 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC005498.1-201ENST00000592125 465 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 DEFB131E-202ENST00000602581 683 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AF250324.2-201ENST00000608299 610 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AP001596.2-201ENST00000608410 312 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AC092954.2-201ENST00000609103 430 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 HMGB1P24-202ENST00000615653 685 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AL354950.2-201ENST00000617939 290 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 U6.99-201ENST00000637524 83 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.33□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.255-201ENST00000364581 97 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 SNORA75B-201ENST00000384053 137 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 RNU6-903P-201ENST00000391270 109 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AL513475.1-201ENST00000406602 315 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 GTF2IP20-201ENST00000431663 360 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC016691.1-201ENST00000441321 413 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC073415.1-201ENST00000449240 153 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AL353705.4-201ENST00000449661 238 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC233279.1-201ENST00000455300 423 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 RNU6-261P-201ENST00000459506 102 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AL163973.1-201ENST00000484753 577 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 GZMAP1-201ENST00000503054 631 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC112206.3-201ENST00000514578 389 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 RNU6-1183P-201ENST00000517054 60 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AL512360.1-201ENST00000555346 234 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 HMGB1P33-201ENST00000563485 527 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 MIR4782-201ENST00000577987 79 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 U6.42-201ENST00000618440 107 ntBASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFWD3Q6PCD5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC004944.1-201ENST00000517807 3059 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MIR412-201ENST00000362142 91 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 RNU6-552P-201ENST00000362869 119 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 Y_RNA.505-201ENST00000384489 102 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MIR578-201ENST00000384828 96 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC023141.4-201ENST00000412031 328 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL135786.1-201ENST00000415892 214 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MTCO1P21-201ENST00000416634 589 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MTCYBP8-201ENST00000422855 651 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC007560.1-201ENST00000426912 237 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL078601.1-201ENST00000444542 271 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AL360271.2-201ENST00000447710 161 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC104136.1-201ENST00000512969 394 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 AP000889.2-201ENST00000532684 490 ntBASIC2.31□□□□□ -2.04
RFWD3Q6PCD5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms