Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 RNU1-73P-201ENST00000383971 164 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-72P-201ENST00000384285 79 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL357075.1-201ENST00000404107 726 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 U3.37-201ENST00000408528 213 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 MTND2P23-201ENST00000422990 651 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL513043.1-201ENST00000439124 535 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL035666.1-201ENST00000446195 348 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 RPL9P9-202ENST00000466501 579 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL162730.1-201ENST00000605734 292 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AC040896.1-201ENST00000613819 479 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AC083806.3-201ENST00000614016 455 ntBASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.82□□□□□ -1.8
CREB3L3Q68CJ9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-827P-201ENST00000365553 106 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.404-201ENST00000383978 102 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.428-201ENST00000384078 102 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 AC099799.1-201ENST00000439809 192 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 RPL30P14-201ENST00000482744 348 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 RPL32P34-201ENST00000486380 400 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 SCARNA16.2-201ENST00000516520 172 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 RN7SKP295-201ENST00000517264 153 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 AMZ2P1-203ENST00000565833 850 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 MIR3609-201ENST00000582661 80 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 uc_338.25-201ENST00000613756 156 ntBASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CREB3L3Q68CJ9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.252-201ENST00000364556 101 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AL117339.3-201ENST00000418733 162 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 RPL23AP22-201ENST00000437556 453 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AL590664.1-201ENST00000448065 339 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 RPL26P9-201ENST00000457466 433 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AC022493.2-201ENST00000506122 481 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AC006445.2-201ENST00000510061 472 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-470P-201ENST00000515954 104 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.661-201ENST00000516003 99 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 H3F3AP1-201ENST00000559984 334 ntBASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CREB3L3Q68CJ9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-778P-201ENST00000363269 103 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.145-201ENST00000363527 102 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-884P-201ENST00000363889 107 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNORA22B-201ENST00000383876 138 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 MIR670-201ENST00000390142 98 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNORA48.7-201ENST00000391302 135 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 RNA5SP293-201ENST00000410527 113 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC005326.1-201ENST00000429197 123 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC011816.1-201ENST00000441346 546 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNORA25.10-201ENST00000515926 124 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNORD116.3-201ENST00000517176 78 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC093331.1-201ENST00000521474 169 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 BNIP3P16-201ENST00000589779 534 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 VN1R107P-201ENST00000601784 209 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC008739.3-201ENST00000603262 127 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 AC099778.2-201ENST00000610904 211 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 U2.21-201ENST00000637295 81 ntBASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.79□□□□□ -1.8
CREB3L3Q68CJ9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.78□□□□□ -1.8
CREB3L3Q68CJ9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CREB3L3Q68CJ9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CREB3L3Q68CJ9 Y_RNA.132-201ENST00000363421 102 ntBASIC3.78□□□□□ -1.8
CREB3L3Q68CJ9 RNU6-1317P-201ENST00000364582 104 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms