Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC107871.2-201ENST00000612894 502 ntBASIC3.91□□□□□ -1.78
E4F1Q66K89 AL354798.1-201ENST00000622505 329 ntBASIC3.91□□□□□ -1.78
E4F1Q66K89 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.91□□□□□ -1.78
E4F1Q66K89 MTND5P7-201ENST00000413558 1798 ntBASIC3.91□□□□□ -1.78
E4F1Q66K89 AC093908.1-201ENST00000623125 8092 ntBASIC3.91□□□□□ -1.78
E4F1Q66K89 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
E4F1Q66K89 RNU6-874P-201ENST00000362390 105 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RNU6-884P-201ENST00000363889 107 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RNU6-105P-201ENST00000363909 104 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 Y_RNA.222-201ENST00000364264 102 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.9□□□□□ -1.79
E4F1Q66K89 Y_RNA.461-201ENST00000384263 103 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RNU6-784P-201ENST00000384330 106 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 U3.39-201ENST00000408569 239 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 Y_RNA.592-201ENST00000410274 109 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
E4F1Q66K89 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.9□□□□□ -1.79
E4F1Q66K89 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RPL30P10-201ENST00000488148 337 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC104564.1-201ENST00000493028 407 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.9□□□□□ -1.79
E4F1Q66K89 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.9□□□□□ -1.79
E4F1Q66K89 Y_RNA.668-201ENST00000516233 93 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 SNORA43.2-201ENST00000516652 128 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 RNU6-579P-201ENST00000516879 102 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.9□□□□□ -1.79
E4F1Q66K89 AC090517.1-201ENST00000569307 266 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC125232.2-201ENST00000592457 143 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AC023043.4-201ENST00000612081 449 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 AL159153.1-201ENST00000619688 317 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
E4F1Q66K89 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.9□□□□□ -1.79
E4F1Q66K89 FAM35BP-202ENST00000497389 3337 ntBASIC3.9□□□□□ -1.79
E4F1Q66K89 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
E4F1Q66K89 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.79
E4F1Q66K89 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
E4F1Q66K89 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
E4F1Q66K89 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
E4F1Q66K89 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.89□□□□□ -1.79
E4F1Q66K89 Y_RNA.214-201ENST00000364201 112 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 RNU1-73P-201ENST00000383971 164 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 Y_RNA.471-201ENST00000384312 102 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 ELOCP20-201ENST00000422460 345 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 TMEM167AP1-201ENST00000423409 219 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.89□□□□□ -1.79
E4F1Q66K89 MTATP6P7-201ENST00000453315 681 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 RN7SKP210-201ENST00000459176 261 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 AL133162.1-201ENST00000463228 453 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 RPL21P104-201ENST00000464143 478 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 RPS4XP22-201ENST00000480755 780 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 SNORA25.11-201ENST00000515935 105 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 HSPE1P20-201ENST00000538133 289 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 AC007458.1-201ENST00000542812 373 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 CYCSP30-201ENST00000546447 172 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.89□□□□□ -1.79
E4F1Q66K89 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.89□□□□□ -1.79
E4F1Q66K89 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.89□□□□□ -1.79
E4F1Q66K89 uc_338.32-201ENST00000615087 172 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
E4F1Q66K89 ZYXP1-201ENST00000617638 118 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 U2.21-201ENST00000637295 81 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 AC009541.1-201ENST00000438279 2662 ntBASIC3.89□□□□□ -1.79
E4F1Q66K89 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
E4F1Q66K89 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
E4F1Q66K89 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
E4F1Q66K89 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.88□□□□□ -1.79
E4F1Q66K89 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 AC106871.1-201ENST00000568324 3102 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.64-201ENST00000362845 102 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 RNU6-778P-201ENST00000363269 103 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.288-201ENST00000364854 92 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 RNU6-806P-201ENST00000365147 105 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.405-201ENST00000383979 100 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.451-201ENST00000384200 100 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 RNU6-708P-201ENST00000384217 107 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.524-201ENST00000384564 100 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 Y_RNA.561-201ENST00000384694 100 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 U8.11-201ENST00000384699 133 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 U8.12-201ENST00000384701 133 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.88□□□□□ -1.79
E4F1Q66K89 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 RNA5SP293-201ENST00000410527 113 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 RPL26P27-201ENST00000414397 437 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 AP000907.1-201ENST00000428428 510 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.88□□□□□ -1.79
E4F1Q66K89 AC007389.2-201ENST00000434630 306 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
E4F1Q66K89 AL136097.1-201ENST00000456945 913 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 AC006026.2-201ENST00000457376 180 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 U8.18-201ENST00000459285 133 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.88□□□□□ -1.79
E4F1Q66K89 AC020593.1-201ENST00000507399 299 ntBASIC3.88□□□□□ -1.79
E4F1Q66K89 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.88□□□□□ -1.79
E4F1Q66K89 AC010265.1-201ENST00000513509 211 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms