Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MTND5P6-201ENST00000422338 1798 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 RNU6-806P-201ENST00000365147 105 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 MIR548H3-201ENST00000408771 118 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 DBIP2-201ENST00000419076 262 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC092047.1-201ENST00000424997 240 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 RBMY2UP-201ENST00000453474 324 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 S100A11P1-201ENST00000477525 312 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC010265.1-201ENST00000513509 211 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC008011.1-201ENST00000545989 227 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 HMGB1P14-201ENST00000557424 591 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AL360157.1-201ENST00000565962 87 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 SDR42E1P4-201ENST00000620894 481 ntBASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.26-201ENST00000362539 101 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.60-201ENST00000362831 98 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 RNU6-428P-201ENST00000362942 107 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 RNU6-72P-201ENST00000384285 79 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 RNA5SP424-201ENST00000390988 115 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AP000275.1-201ENST00000411943 390 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC096920.1-201ENST00000423991 241 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 SDAD1P3-201ENST00000427380 333 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC017083.1-201ENST00000428093 483 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AP000873.1-201ENST00000463987 400 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC025518.1-201ENST00000479856 347 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC067942.3-201ENST00000512025 362 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 SNORA31.6-201ENST00000516241 130 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.706-201ENST00000516933 99 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 MIR4782-201ENST00000577987 79 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USPL1Q5W0Q7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AC022336.2-201ENST00000568966 2538 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RNU6-78P-201ENST00000362897 107 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RNU6-336P-201ENST00000364891 107 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 MIR607-201ENST00000385241 96 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 BTF3L4P2-201ENST00000392798 346 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AL513124.1-201ENST00000450410 614 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 CEACAMP4-201ENST00000457676 421 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RN7SL807P-201ENST00000470923 297 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 MTND1P19-201ENST00000511780 315 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 FTH1P9-201ENST00000513251 355 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RNU1-103P-201ENST00000516502 125 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RPL23AP78-201ENST00000599928 470 ntBASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USPL1Q5W0Q7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 MIR335-201ENST00000362173 94 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RNA5SP189-201ENST00000364920 115 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RNY3P4-201ENST00000384428 101 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 MTND4LP30-201ENST00000454092 297 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RPL31P13-201ENST00000484151 370 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC005921.1-201ENST00000510589 286 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RNU2-27P-201ENST00000516185 142 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 RNU6-703P-201ENST00000516946 107 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 SNORA31.18-201ENST00000517043 134 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC007375.1-201ENST00000554513 578 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 MIR4298-201ENST00000584380 73 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AP000553.6-201ENST00000641242 118 ntBASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.61□□□□□ -1.67
USPL1Q5W0Q7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.6□□□□□ -1.67
USPL1Q5W0Q7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms