Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-1064P-201ENST00000410626 104 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 OR2AH1P-201ENST00000425717 928 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AC008065.1-201ENST00000428525 348 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RPL23AP58-201ENST00000440453 469 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 Y_RNA.797-201ENST00000515977 94 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AC127455.1-201ENST00000565496 145 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 DNAJC19P2-201ENST00000593340 302 ntBASIC5.25□□□□□ -1.57
RC3H1Q5TC82 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RC3H1Q5TC82 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 MAPK10-320ENST00000641462 6696 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 Z73965.1-201ENST00000623412 2297 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 SNORA60-201ENST00000362396 134 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 RNU6-1272P-201ENST00000362776 107 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 RNU4-80P-201ENST00000363200 141 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 RNU6-1286P-201ENST00000383871 107 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 Y_RNA.420-201ENST00000384043 110 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 RNU6-541P-201ENST00000384709 110 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 MIR10B-201ENST00000385011 110 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 RNU6-1001P-201ENST00000411265 100 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 CYCSP32-201ENST00000440548 321 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 MIR4431-201ENST00000579990 94 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 AL161756.2-201ENST00000604597 246 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 AP001273.1-201ENST00000624493 3152 ntBASIC5.24□□□□□ -1.57
RC3H1Q5TC82 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RC3H1Q5TC82 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 BTF3P11-201ENST00000426582 477 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 RPS15AP5-201ENST00000436276 388 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 GEMIN8P3-201ENST00000445417 720 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 RNA5SP103-201ENST00000459503 118 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC108022.1-201ENST00000493466 478 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 SNORD116-26-201ENST00000516006 96 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 RNA5SP165-201ENST00000517142 115 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC026403.1-201ENST00000518938 295 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC022616.8-201ENST00000533569 253 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 MIR5695-201ENST00000579717 85 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AC002545.1-201ENST00000592511 181 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 MIR6868-201ENST00000611215 58 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AL356489.2-201ENST00000566968 3528 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 AL672167.1-204ENST00000641875 3017 ntBASIC5.23□□□□□ -1.57
RC3H1Q5TC82 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RC3H1Q5TC82 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AL353743.1-202ENST00000431724 1695 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AC116096.1-201ENST00000566804 2314 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 RNU6-755P-201ENST00000364400 103 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 SNORA9-201ENST00000384215 133 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 RNU6-376P-201ENST00000384731 106 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 RPS20P10-201ENST00000451209 253 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AF186996.7-201ENST00000492781 209 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 BTF3L4P4-201ENST00000506381 449 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 CYCSP30-201ENST00000546447 172 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AC022968.1-201ENST00000567372 442 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 MIR5684-201ENST00000585074 65 ntBASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.22□□□□□ -1.57
RC3H1Q5TC82 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.21□□□□□ -1.57
RC3H1Q5TC82 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RC3H1Q5TC82 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RC3H1Q5TC82 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
RC3H1Q5TC82 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms