Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MIR1290-201ENST00000408735 78 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL360271.2-201ENST00000447710 161 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 RNU7-167P-201ENST00000459160 62 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC117503.1-201ENST00000472241 394 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 RPS20P22-201ENST00000473700 357 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 SNORA19.2-201ENST00000516013 114 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 RNA5SP290-201ENST00000517133 127 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL670379.10-201ENST00000604330 253 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL670379.9-201ENST00000605428 253 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC107294.1-201ENST00000609524 467 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC107871.2-201ENST00000612894 502 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 uc_338.15-201ENST00000615470 191 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC022418.1-201ENST00000624118 445 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 MTND1P37-201ENST00000636562 264 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.89
TTC39AQ5SRH9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 SNORD113-7-201ENST00000363762 77 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.474-201ENST00000384341 102 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 RPLP0P7-201ENST00000416050 667 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 NDUFA5P4-201ENST00000436704 385 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 CECR9-201ENST00000453421 199 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 RPS15AP34-201ENST00000487776 387 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 TRBVA-201ENST00000498804 316 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 MTND3P25-201ENST00000509243 135 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC104136.1-201ENST00000512969 394 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.682-201ENST00000516457 100 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.691-201ENST00000516611 103 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 RNU6-143P-201ENST00000516942 93 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 MIR3672-201ENST00000584290 82 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 RPL23AP78-201ENST00000599928 470 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 NUTF2P8-201ENST00000604593 363 ntBASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TTC39AQ5SRH9 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 SNORD62.1-201ENST00000362541 86 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 RNU4-79P-201ENST00000362764 141 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 MTND1P14-201ENST00000427400 950 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 GPM6BP2-201ENST00000432046 144 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC009237.8-201ENST00000445492 379 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 GPM6BP1-201ENST00000446387 144 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC233279.1-201ENST00000455300 423 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AL160314.1-201ENST00000490836 438 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC022493.1-201ENST00000492984 337 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 SNORA14.1-201ENST00000516113 141 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 RNU6-256P-201ENST00000516747 97 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AP000889.2-201ENST00000532684 490 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 MTCO3P23-201ENST00000561363 289 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 MIR548AC-201ENST00000585049 88 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 MIR5692C1-201ENST00000585309 91 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC002044.1-201ENST00000606707 158 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 FAM157A-202ENST00000615155 405 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms