Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 Z98749.2-208ENST00000381646 500 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 RNU6-601P-201ENST00000384540 107 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AL356057.3-201ENST00000402607 340 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AL357075.1-201ENST00000404107 726 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 BX679664.1-201ENST00000434429 253 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AC009969.1-201ENST00000438726 172 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 MTND1P17-201ENST00000448961 204 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 MIR2053-201ENST00000459295 91 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 snoU109.2-201ENST00000459316 135 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 RN7SL594P-201ENST00000470590 287 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AC008526.1-201ENST00000509149 338 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 SMURF2P1-201ENST00000514992 481 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 CYCSP27-201ENST00000527643 293 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 CYP2C61P-201ENST00000604072 290 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AL162713.1-201ENST00000604480 262 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AP000654.2-201ENST00000605633 586 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 RNU6-85P-201ENST00000605989 107 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AL138726.1-201ENST00000614873 333 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 MIR422A-201ENST00000362286 90 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.133-201ENST00000363428 110 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 RNU1-73P-201ENST00000383971 164 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.482-201ENST00000384377 111 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 RNU6-310P-201ENST00000384655 107 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 SNORD73A-201ENST00000386062 65 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.646-201ENST00000410980 101 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AL590632.1-201ENST00000424289 371 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AL160004.2-201ENST00000432935 350 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 SNRPEP4-201ENST00000435815 279 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 ELOCP24-201ENST00000456370 334 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 RNU6-703P-201ENST00000516946 107 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC022634.1-201ENST00000520765 532 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC068657.1-201ENST00000520807 306 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AL391261.3-201ENST00000557194 520 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 CYCSP39-201ENST00000565821 309 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC100830.2-201ENST00000581636 240 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 MTND5P10-201ENST00000603719 1809 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 AC022336.2-201ENST00000568966 2538 ntBASIC3.48□□□□□ -1.85
SLC44A4Q53GD3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-37P-201ENST00000362692 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-11P-201ENST00000364234 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-7-201ENST00000364784 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-8-201ENST00000365467 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-25P-201ENST00000383873 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1-201ENST00000383898 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-48P-201ENST00000384161 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-36P-201ENST00000384172 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-4P-201ENST00000384205 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-5P-201ENST00000384238 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-3P-201ENST00000384314 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-16P-201ENST00000384385 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-15P-201ENST00000384534 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-2-201ENST00000384627 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-29P-201ENST00000384637 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-9-201ENST00000384776 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNU6-33P-201ENST00000384793 107 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RNA5SP252-201ENST00000391131 119 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RPL7P37-201ENST00000425095 738 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RPL23AP82-202ENST00000427528 469 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AL627311.1-201ENST00000431514 115 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RPL7P42-201ENST00000481005 679 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 RPS27AP10-201ENST00000496103 208 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC104576.1-201ENST00000524225 88 ntBASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC44A4Q53GD3 MIR4782-201ENST00000577987 79 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms