Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
NCBP3Q53F19 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 USP8P1-201ENST00000494673 3183 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NCBP3Q53F19 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NCBP3Q53F19 RNU6-497P-201ENST00000365316 104 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 RN7SKP69-201ENST00000365390 305 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 RNU6-117P-201ENST00000365415 107 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 AC099670.2-201ENST00000435130 321 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 AC091912.1-201ENST00000511351 248 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 RNY4P20-201ENST00000516678 93 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.34□□□□□ -1.23
NCBP3Q53F19 FAM27D1-201ENST00000612308 341 ntBASIC7.34□□□□□ -1.23
NCBP3Q53F19 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NCBP3Q53F19 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NCBP3Q53F19 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 RNU6-242P-201ENST00000384359 107 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 HSPE1P12-201ENST00000412576 301 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 EIF4EP4-201ENST00000424916 578 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 AC084357.1-201ENST00000473404 255 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 RNA5SP497-201ENST00000516081 97 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 AC106785.1-201ENST00000565935 262 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 MIR4302-201ENST00000638058 60 ntBASIC7.33□□□□□ -1.24
NCBP3Q53F19 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.33□□□□□ -1.24
NCBP3Q53F19 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NCBP3Q53F19 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.32□□□□□ -1.24
NCBP3Q53F19 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NCBP3Q53F19 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NCBP3Q53F19 RNA5SP453-201ENST00000362503 119 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 MIR1283-1-201ENST00000408494 87 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 AC064862.4-201ENST00000442180 334 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 RNU2-13P-201ENST00000515909 113 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 RNU6-1270P-201ENST00000517128 108 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.32□□□□□ -1.24
NCBP3Q53F19 MIR3614-201ENST00000581261 86 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 AC007448.1-201ENST00000582714 234 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 MIR4753-201ENST00000585119 83 ntBASIC7.32□□□□□ -1.24
NCBP3Q53F19 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NCBP3Q53F19 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NCBP3Q53F19 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NCBP3Q53F19 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 RNU6-1276P-201ENST00000365372 104 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 Y_RNA.344-201ENST00000365381 112 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 MIR551A-201ENST00000385042 96 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 MIR708-201ENST00000390708 88 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 RNU6-57P-201ENST00000411348 103 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 GPS2P1-201ENST00000411761 986 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.31□□□□□ -1.24
NCBP3Q53F19 RNU6-221P-201ENST00000459541 99 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 RN7SL197P-201ENST00000466981 299 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 SCARNA21.2-201ENST00000516600 166 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 AP001781.1-201ENST00000530977 207 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 AP006289.1-201ENST00000538089 277 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 AC012493.2-201ENST00000595083 291 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 JPX_2.1-201ENST00000614161 69 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.31□□□□□ -1.24
NCBP3Q53F19 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NCBP3Q53F19 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NCBP3Q53F19 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 RNU6-1125P-201ENST00000363601 107 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 CRYBB2P1-203ENST00000415709 538 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 AC063976.3-201ENST00000426849 329 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 NDUFB4P8-201ENST00000435351 367 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 RPS4XP11-201ENST00000446897 772 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 RN7SL174P-201ENST00000475578 289 ntBASIC7.3□□□□□ -1.24
NCBP3Q53F19 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC7.3□□□□□ -1.24
NCBP3Q53F19 SCARNA15-202ENST00000516881 127 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms