Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL157817.1-201ENST00000614264 790 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AL162274.2-201ENST00000614406 332 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC010889.1-201ENST00000566193 2666 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 MIR548K-201ENST00000408406 116 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 MIR548F5-201ENST00000408421 86 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AL078601.1-201ENST00000444542 271 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 RPL23AP70-201ENST00000483361 460 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC022493.1-201ENST00000492984 337 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 RN7SKP40-201ENST00000517211 242 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 RNA5SP454-201ENST00000517231 127 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 COX6CP5-201ENST00000527162 228 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC023043.2-201ENST00000589678 1026 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 AC002044.1-201ENST00000606707 158 ntBASIC3.59□□□□□ -1.83
LONRF3Q496Y0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LONRF3Q496Y0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.59□□□□□ -1.84
LONRF3Q496Y0 AL021368.2-201ENST00000606125 5352 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 Y_RNA.212-201ENST00000364177 102 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 RNU6-266P-201ENST00000364225 107 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC096649.2-201ENST00000416186 393 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC092427.1-202ENST00000430569 476 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 RPS12P18-201ENST00000442381 270 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 HMGN2P10-201ENST00000448085 265 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 BTF3P15-201ENST00000455606 336 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AP001486.1-201ENST00000463339 476 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC008716.1-201ENST00000511084 513 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 SNORA25.17-201ENST00000517184 124 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 RNU6-323P-201ENST00000521915 107 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 COPS8P3-201ENST00000526024 482 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC006199.1-201ENST00000548728 219 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC007151.1-201ENST00000572774 483 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 MIR4790-201ENST00000577799 79 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC138761.3-201ENST00000579993 334 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC007938.3-201ENST00000604965 623 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC016727.1-205ENST00000605437 569 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 uc_338.25-201ENST00000613756 156 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AL138726.1-201ENST00000614873 333 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 AC099654.10-201ENST00000640395 161 ntBASIC3.58□□□□□ -1.84
LONRF3Q496Y0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 Y_RNA.135-201ENST00000363439 95 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 SNORD116-11-201ENST00000383882 92 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 SNORA75B-201ENST00000384053 137 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RPL21P3-201ENST00000395517 478 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RNU6-607P-201ENST00000411283 108 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC074085.1-201ENST00000413598 418 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AL353621.1-201ENST00000418219 243 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AL161651.1-201ENST00000440882 223 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RPL32P28-201ENST00000443577 397 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC107399.1-201ENST00000451226 265 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC146507.2-201ENST00000460608 476 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC006445.1-201ENST00000491925 405 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RNU6-581P-201ENST00000516214 105 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RNA5SP341-201ENST00000516261 117 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AP005639.2-201ENST00000527592 928 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.57□□□□□ -1.84
LONRF3Q496Y0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.57□□□□□ -1.84
LONRF3Q496Y0 APOOP1-201ENST00000604695 592 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms