Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL359854.1-201ENST00000614203 1594 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 AL359740.1-201ENST00000624340 592 ntBASIC2.38□□□□□ -2.03
SHROOM1Q2M3G4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-179P-201ENST00000363350 107 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 SNORA62.1-201ENST00000364287 154 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RNA5SP240-201ENST00000365355 128 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 SNORA51.11-201ENST00000384442 131 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-456P-201ENST00000384493 107 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MIR218-1-201ENST00000384999 110 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AL133475.1-201ENST00000404414 305 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MTND3P17-201ENST00000416968 344 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MTCO2P34-201ENST00000421994 607 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AIMP1P2-201ENST00000425294 312 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MTND4P32-201ENST00000437189 1237 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 BRK1P2-201ENST00000442875 223 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AL360221.1-201ENST00000445989 335 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC079448.1-201ENST00000449377 373 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AL583843.1-201ENST00000456070 346 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 KLF3P2-201ENST00000465138 268 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 MTAPP1-201ENST00000489154 819 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC022493.1-201ENST00000492984 337 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AP005136.1-201ENST00000579765 429 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC011494.1-201ENST00000596454 237 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC087752.4-201ENST00000605911 462 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 RN7SKP299-201ENST00000606679 301 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AL139286.2-201ENST00000606838 396 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC090582.1-201ENST00000636321 199 ntBASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHROOM1Q2M3G4 AC103710.2-202ENST00000641454 2853 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 Y_RNA.367-201ENST00000365544 101 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-116P-201ENST00000384042 109 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 SNORA75-201ENST00000384158 137 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 SNORD116-1-201ENST00000384335 95 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-166P-201ENST00000384371 107 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 Y_RNA.553-201ENST00000384670 102 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC000111.3-201ENST00000433478 193 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 GPR143P-201ENST00000434155 205 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 RPS15AP9-201ENST00000439856 381 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 ARL2BPP4-201ENST00000506854 471 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC008526.1-201ENST00000509149 338 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-548P-201ENST00000517083 115 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC135279.1-201ENST00000543493 504 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 LINC00933-203ENST00000559812 219 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC091152.3-201ENST00000604227 325 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AC009090.3-201ENST00000616553 565 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 AL353997.5-201ENST00000618886 171 ntBASIC2.36□□□□□ -2.03
SHROOM1Q2M3G4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-181P-201ENST00000363225 107 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-19P-201ENST00000384718 107 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 SNORA40.18-201ENST00000391200 128 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 SNORA40C-201ENST00000391285 128 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC016831.2-201ENST00000417179 352 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AL078601.1-201ENST00000444542 271 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC007677.1-201ENST00000445757 515 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AL162395.1-201ENST00000457882 422 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC006512.1-201ENST00000468816 291 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC117503.1-201ENST00000472241 394 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 RPS27P21-201ENST00000486977 252 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC104806.1-201ENST00000508720 308 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-445P-201ENST00000516949 107 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 RNU6-410P-201ENST00000517006 107 ntBASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM1Q2M3G4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms