Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 VN1R108P-201ENST00000431580 830 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 RPS15AP9-201ENST00000439856 381 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 MTND1P30-201ENST00000441241 901 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 PSPHP1-201ENST00000450062 261 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 SSXP1-201ENST00000453640 473 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AL441985.1-201ENST00000457727 251 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 RNU6-953P-201ENST00000459154 107 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC112771.1-201ENST00000463581 102 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 SNORA31.19-201ENST00000517079 126 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3A2Q15428 MIR548AB-201ENST00000584917 84 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC040904.1-201ENST00000590850 223 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC112187.2-201ENST00000604345 283 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC068276.1-201ENST00000605793 379 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 MTND5P42-201ENST00000637720 498 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC006927.3-201ENST00000638789 384 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A2Q15428 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A2Q15428 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SF3A2Q15428 Y_RNA.77-201ENST00000362962 107 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 Y_RNA.224-201ENST00000364308 111 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 Y_RNA.318-201ENST00000365131 97 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 Y_RNA.534-201ENST00000384599 112 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.9□□□□□ -2.11
SF3A2Q15428 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.9□□□□□ -2.11
SF3A2Q15428 AL591212.2-201ENST00000433923 257 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 MTCO2P16-201ENST00000436962 677 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 SNORD97-201ENST00000459187 142 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 snoU13.18-201ENST00000459483 104 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.11
SF3A2Q15428 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.9□□□□□ -2.11
SF3A2Q15428 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.9□□□□□ -2.11
SF3A2Q15428 AC060788.1-201ENST00000521318 469 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 LINC00933-203ENST00000559812 219 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 SUB1P3-201ENST00000564581 315 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 PCMTD1P2-201ENST00000565017 355 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.9□□□□□ -2.11
SF3A2Q15428 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 MIR3683-201ENST00000580847 82 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 MIR4303-201ENST00000581299 66 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC092354.1-201ENST00000606057 376 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AL031775.1-201ENST00000607014 887 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC130324.3-201ENST00000614165 542 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AL158063.1-201ENST00000615349 536 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 uc_338.12-201ENST00000616344 181 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 U4atac.1-201ENST00000618345 95 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC068137.4-201ENST00000638485 296 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
SF3A2Q15428 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SF3A2Q15428 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SF3A2Q15428 RNY4P24-201ENST00000362735 96 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 RNU4-21P-201ENST00000362802 126 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 RNU6-511P-201ENST00000363496 107 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 SNORA4.3-201ENST00000365564 137 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 MIR518D-201ENST00000385014 87 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SF3A2Q15428 BTF3L4P1-201ENST00000413813 468 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
SF3A2Q15428 AL353777.1-201ENST00000425552 326 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.89□□□□□ -2.11
SF3A2Q15428 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
SF3A2Q15428 BTF3P15-201ENST00000455606 336 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.89□□□□□ -2.11
SF3A2Q15428 AC140059.1-201ENST00000489238 361 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC022493.1-201ENST00000492984 337 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC082651.2-201ENST00000496833 166 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 RNU6-914P-201ENST00000516749 109 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 RNU6-201P-201ENST00000517100 61 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.89□□□□□ -2.11
SF3A2Q15428 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.89□□□□□ -2.11
SF3A2Q15428 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 MTCYBP33-201ENST00000575007 1130 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SF3A2Q15428 AC121334.2-201ENST00000605387 271 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC022893.3-201ENST00000607665 437 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AL365204.3-201ENST00000612448 685 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.89□□□□□ -2.11
SF3A2Q15428 AC138627.2-201ENST00000624202 601 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC092104.1-201ENST00000497346 1441 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
SF3A2Q15428 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SF3A2Q15428 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SF3A2Q15428 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms